Gene Information

Name : Sfri_2092 (Sfri_2092)
Accession : YP_750776.1
Strain : Shewanella frigidimarina NCIMB 400
Genome accession: NC_008345
Putative virulence/resistance : Unknown
Product : class V aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1104
EC number : -
Position : 2490221 - 2491282 bp
Length : 1062 bp
Strand : -
Note : PFAM: aminotransferase, class V; KEGG: ecu:ECU11_1770 cysteine desulfurase

DNA sequence :
ATGAATGCTTTTGAGACATTTTATGCAAATTCAGCATCCAGTCATTTAATGGGTTCAATTGTTCAAAAAGAAATTGATCA
AGTAAGAGAAAAACTAGCGGATTCAATTGGCGCTTATCCAAGTGAAATTGTGTTTACTAGTGGCGCAACGGAATCAAATA
ACATCGCTTTTAAAAGCTTGCTGTTAAGTGGTGACATCCCTACAGGAAAAAACCATATAGTCACATCCACAATTGAGCAC
AAGTGCGTATTAGCGATATGTGATTATTTTAAATCGATTGGTTTTGAAGTGACTTACATTAAACCTAATGTAGATGGCAT
TATTTGCCCGAATGATGTTAAGGATGCCATTAACGAAAAAACGGCATTAGTGTCAATCATGCACGTTAATAACGAATTAG
GCACAATTAATCCGATTGGTGAAATCGGTAAATTATGCTCTGAAAACAATATTATATTCCATTCAGATGCAGCCCAGAGT
TATGGAAAAACAGAGATCGATGTCGATAATTTTAATATAGATGTCATGTCATTTTCAGCACACAAAGTCGGTGGCCCAAA
AGGCATTGGCGCGATCTACATACGAGATTTACGCCACAGAAAACTTTTGCCAGTTATTCATGGCGCTGGCCAAGAGCAAG
GTTTGAGGGGCGGAACAATTGCTGCGCCTTTGATTATTGGTTATGGAACCGCAATTGATTTATTCCCGAAATATTACCAA
TCGTTTTCTGAAATGCGCATAAAAGAGTACTTAATTGAAGGGCTCAGTAATGAAGGGATTGGCTTTAACATAAATGGCCG
AACTAAAGCCTTACCTCATTGTTTGTCCTTAACACTTTTGAATACCAACGTAGCGTTAATGATCAGAGAAAATGATCAGA
CAATTAGTTTAGCTCAAGGCTCAGCTTGTTCTTCAAAAGAAATCGAAGCTTCGCATGTATTAACATCTCTAGGTTTAACG
CGTGAACAAGCTGAAGGTACTATTAGACTTAGTTTTCCACTTGATGTGACATTTGAACAAATTGATATATTTATCAAAGC
TGTAAAAAAAGCGACTAGATAG

Protein sequence :
MNAFETFYANSASSHLMGSIVQKEIDQVREKLADSIGAYPSEIVFTSGATESNNIAFKSLLLSGDIPTGKNHIVTSTIEH
KCVLAICDYFKSIGFEVTYIKPNVDGIICPNDVKDAINEKTALVSIMHVNNELGTINPIGEIGKLCSENNIIFHSDAAQS
YGKTEIDVDNFNIDVMSFSAHKVGGPKGIGAIYIRDLRHRKLLPVIHGAGQEQGLRGGTIAAPLIIGYGTAIDLFPKYYQ
SFSEMRIKEYLIEGLSNEGIGFNINGRTKALPHCLSLTLLNTNVALMIRENDQTISLAQGSACSSKEIEASHVLTSLGLT
REQAEGTIRLSFPLDVTFEQIDIFIKAVKKATR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 2e-46 41