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Name : rnhA (Sfri_2205) Accession : YP_750889.1 Strain : Shewanella frigidimarina NCIMB 400 Genome accession: NC_008345 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 2638643 - 2639116 bp Length : 474 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGGCCGAACTCAAACAGCTGTATATTTTTACTGATGGCTCTTGCTTAGGAAATCCAGGACCTGGCGGTTATGGCGTGGT AATGAAATATAAACATCAGCAACATGAAATCGCCGATGGATTCTCATTAACAACCAATAATCGTATGGAACTTTTAGCCC CAATTATCGCGTTAGAAACGTTATACGAACCCTGTAATATTATTTTAACCAGCGATAGCCAGTATATGCGCCAAGGTATT ATGACTTGGATCCATGGTTGGAAGAAAAAAGGCTGGATAACCTCAACTAAACAACCTGTCAAAAACGTCGATTTATGGAA GCGTCTAGATGCGGTAAGTCAATTACACAAGATTGACTGGCACTGGGTAAAAGGCCATGCAGGCCATATTGAAAATGAAC GTTGCGACGTATTGGCACGCAAAGCAGCCGAAGCTAAACCTCAACAAGTTGATACTGGTTATAATCCTGAATAA Protein sequence : MAELKQLYIFTDGSCLGNPGPGGYGVVMKYKHQQHEIADGFSLTTNNRMELLAPIIALETLYEPCNIILTSDSQYMRQGI MTWIHGWKKKGWITSTKQPVKNVDLWKRLDAVSQLHKIDWHWVKGHAGHIENERCDVLARKAAEAKPQQVDTGYNPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 2e-46 | 64 |
