Gene Information

Name : cspA (pRL120765)
Accession : YP_765268.1
Strain :
Genome accession: NC_008378
Putative virulence/resistance : Unknown
Product : cold shock protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 834189 - 834392 bp
Length : 204 bp
Strand : -
Note : similarity:fasta; SWALL:CSPA_RHIME (SWALL:Q9Z3S6); Rhizobium meliloti; cold shock protein CspA; length 69 aa; id=54.54; ungapped id=56.25; E()=1.6e-09; 66 aa overlap; query 1-64 aa; subject 1-66 aa; similarity:fasta; SWALL:Q930U8 (EMBL:AE007204); Rhizobiu

DNA sequence :
ATGCCGACAGGTACCGTTAAATTCTTCAATGACGACAAGGGCTTCGGCTTCATCACCCCTGAGGGTGGCGGGCAGGACGT
TTTTGTTCACGTGTCTGCGCTGCAAAGCGGCGGGTCGCTCCGCGAAGGCGACAAGGTCAGCTTCGAAGTTGGACAGGATC
GCAAGACCGGAAAATCGAAGGCTGAGAACGTCTCGACCCTCTGA

Protein sequence :
MPTGTVKFFNDDKGFGFITPEGGGQDVFVHVSALQSGGSLREGDKVSFEVGQDRKTGKSKAENVSTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 4e-09 57