Gene Information

Name : cspA (pRL90321)
Accession : YP_765603.1
Strain :
Genome accession: NC_008379
Putative virulence/resistance : Unknown
Product : putative cold shock protein CspA
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 351340 - 351546 bp
Length : 207 bp
Strand : -
Note : similarity:fasta; SWALL:CSPA_RHIME (SWALL:Q9Z3S6); Rhizobium meliloti; cold shock protein cspa; name=cspa; orderedlocusnames=r02057; orfnames=smc04318; length 69 aa; 68 aa overlap; query 1-68 aa; subject 1-68 aa; similarity:fasta; SWALL:Y4CH_RHISN (SWALL:

DNA sequence :
ATGGCGACCGGTACGGTAAAGTGGTTCGACGCAACGAAGGGCTCCGGCTTCATCCAGCCGGACGACGGCAGCATCGATGT
GTTCGTCCACATTTCCGCGGTAGAGCGGGCTGGCCGCCTTGGCCTCAACGATGGCCAGAAGATTGCCTACGAACTGGTGA
AGGATCGCATGTCAGGCAAGATGTCGGCGGACAACCTCCAAGCCTAG

Protein sequence :
MATGTVKWFDATKGSGFIQPDDGSIDVFVHISAVERAGRLGLNDGQKIAYELVKDRMSGKMSADNLQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-08 50