Gene Information

Name : cspA (pRL110542)
Accession : YP_771576.1
Strain :
Genome accession: NC_008384
Putative virulence/resistance : Unknown
Product : putative cold shock protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 587355 - 587564 bp
Length : 210 bp
Strand : +
Note : similarity:fasta; SWALL:CSPA_RHIME (SWALL:Q9Z3S6); Rhizobium meliloti; cold shock protein; cspA; length 69 aa; 69 aa overlap; query 1-69 aa; subject 1-69 aa; similarity:fasta; SWALL:Q98P79 (EMBL:AP003017); Rhizobium loti; cold shock protein; length 69 aa;

DNA sequence :
ATGACCACTGGCACAGTTAAATGGTTCAATTCCACCAAGGGCTTCGGCTTCATTCAGCCTGATGACGGCGGCGCTGACGC
CTTCGTCCACATCTCTGCCGTCGAGCGCGCCGGCATGCGCGAAATCGTCGAAGGCCAGAAGATCGGCTACGAGCTTGAGC
GCGATAACAAGTCGGGCAAAATGTCCGCTTGCAATCTCCAAGCTGCTTAA

Protein sequence :
MTTGTVKWFNSTKGFGFIQPDDGGADAFVHISAVERAGMREIVEGQKIGYELERDNKSGKMSACNLQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-10 49