Gene Information

Name : Bamb_0387 (Bamb_0387)
Accession : YP_772280.1
Strain :
Genome accession: NC_008390
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 431997 - 434666 bp
Length : 2670 bp
Strand : +
Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A3565 chaperonin ClpA/B/, ATPase

DNA sequence :
ATGAGCACGCCTCTGAAGACCCTGATCACGAAACTGAACCCGCTGTGCCGGCACGCGACCGAGCGTGCGGCGAGCGCGTG
CCTGGCGCGCGGCCATTACGAGGTCGATCTGGAGCACCTGTTCCTCGCGCTGCTCGACGAGGCGACGGGCGACCTGCCGC
TCGCACTGCGCGCGAGCCGCGTCGATCCGCATGCGCTGCGTGCCGATCTCGAGCGCGAACTCACGCGGCTGAAGACGGGC
AACACGCGCACGCCGGTTTTCTCCGTGCATCTGATCGCGCTGTTCGAGCAGGCATGGCTGATCGCGTCGCTCGATTCGCA
GCTCGGCCGCATCCGCTCGGGGCACCTGCTGCTCGCGCTGCTGACCGCGCCCGATCTCGCGCAGTTCGCGCAGCGCATGT
CGCCGCAGTTCGCGGAAATGAACGTGACGGACCTGAAGCACAAGTTCGACGAGATCATGGGCGGCTCGAGCGAGGCCGAG
CCGCGCCAGCTGGATACGGAAGAGGGTGACGTCGCGCCGGCCGCCAACGGCGCCTTGCCCGCGGCCGGCCCGTCGAAGAC
GCCCGCGCTCGACACGTACACGACCAACCTCACGCAGCGTGCGCGCGACGGCAAGATCGATCCGGTGATCGGTCGCGAAG
CCGAGATCCGCCAGGCGATCGACATCCTGATGCGCCGGCGCCAGAACAACCCGATCATGACCGGCGAGGCCGGCGTCGGC
AAAACGGCGGTCGTCGAGGGCCTCGCGTTGCGGATCGCGGCCGACGACGTGCCGCCGCCGCTGCGTGGCGTCGCGCTGCA
CGTGCTCGACATGGGCCTGCTGCAGGCCGGCGCGAGCGTGAAGGGCGAGTTCGAGAACCGTCTGAAGAGCGTGATCGACG
AGGTGAAGAAGAGCGCGCACCCGATCATCCTGTTCATCGACGAGGCGCACACGATCATCGGCGCGGGCGGCCAGGCCGGC
CAGAACGACGCGGCGAACCTGCTGAAGCCGGCGCTCGCGCGTGGCGAGCTGCGCACGATCGCCGCGACGACGTGGAGCGA
ATACAAGAAGTACTTCGAGAAGGATGCGGCGCTTGCGCGGCGTTTCCAGGTCGTGAAGGTCGAGGAGCCGAGCGAGCCGC
TCGCGGCCGCGATGCTGCGCGGGATGTCCGGGCTGATGGAGAAGCACTTCAACGTGCGGATCCTCGACGATGCGATCACC
GAGGCCGTGCGCCTGTCGCATCGCTACATCAGCGGCCGCCAGCTGCCGGACAAGGCGATCAGCGTGCTCGACACCGCGTG
CGCGAAGGTCGCGCTCGCGCACAGCGCGACGCCGGCGACGATCGACGACACGAAGAAGCGCATCGAGCGCATCGACGCGG
AAATCGCGTCGCTGGAGCGCGAATCGGCGGGCGGCGCGTCGCACGACGAGCGGCTGCTCGAACTGCGCGGCGCGCGCGAC
ACTGCGCTCGCGCAATTGGCCGAGGACGAGGCGCGCTATGAAGCCGAGCGCGTGATCGTCGCCGAGATCACCGAACTGCG
TGATGCGCTCGACAAGGCGCGCGGCCCGTCGGAAGACGGCGAGCCGGTCGACGTGTCGGCCACTCGCGAGAAGCTGACGG
AGCGCGTCGCGGCGCTGCACGCGCTGCAGGGCGGCGAGCCGATGGTGCCGCTGCAGGTCGACGGCCATGTCGTCGCCGAG
ATCGTCGCCGCGTGGACCGGCATTCCGCTCGGCCGTATGGTGAAGGACGAGATCGACACCGTGCTGAATCTGCAGCCGCT
GCTGAGTGCGCGCGTGATCGGCCAGGACCATGCGCTGGACGCGATCGCGCAGCGCGTGCGCACGGCGACCGCGAACCTCG
AGGATCCGAACAAGCCGCGCGGCGTGTTCATGTTCGTCGGGCCGTCGGGCGTGGGCAAGACCGAGACGGCGCTCGCGCTG
GCCGACATCCTGTACGGCGGCGAGCGCAAGATGGTCACGATCAACATGAGCGAGTACCAGGAAGCGCACAGCGTGTCGGG
CCTGAAGGGTTCGCCGCCGGGCTACGTCGGCTACGGCGAAGGCGGCGTGCTGACCGAGGCCGTGCGCCGCAACCCGTATT
CCGTCGTGCTGCTCGATGAAGTCGAGAAGGCGCACCCGGACGTGCTCGAGATGTTCTTCCAGGTGTTCGACAAGGGCACG
ATGGACGACGCCGAAGGGCGCGAGATCGACTTCCGCAACACGCTGATCATCCTGACGTCGAACGTCGGGTCGGCCGCGGT
GATGCAGGCGTGCCTGAACAAGCCGGCCGAGGAGCTGCCCGATCCGGACGCGCTCGCCGAGGCGCTGCGCCCGCAGCTGT
ACAAGACGTTCAAGCCCGCGTTCCTCGGCCGGATGAAGGTCGTGCCGTACTACCCGATTTCCGACGACGTGCTGGCCGAG
ATCATCGAGCTGAAGCTCGAACGGATCCGCCGCCGCATCGACGCGAACCACAAGGCCGCGTTCGAGTGGGACGAATCGCT
CGTCGATGCGGTGCTCGCGCGCTGCACCGAGGTCGACTCGGGCGCCCGCAACGTCGACCACATCCTGAACGGCACGTTGC
TGCCGGAGATCGCGGGCCACGTGCTCGGCCGGATCGCCGACGGCGCGGCCATCGCGCGCATCGCGGTGCGCGCGGACGAG
GCCGGCGAATTCGCTTACACCGTCGAATGA

Protein sequence :
MSTPLKTLITKLNPLCRHATERAASACLARGHYEVDLEHLFLALLDEATGDLPLALRASRVDPHALRADLERELTRLKTG
NTRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLALLTAPDLAQFAQRMSPQFAEMNVTDLKHKFDEIMGGSSEAE
PRQLDTEEGDVAPAANGALPAAGPSKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVG
KTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAG
QNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPSEPLAAAMLRGMSGLMEKHFNVRILDDAIT
EAVRLSHRYISGRQLPDKAISVLDTACAKVALAHSATPATIDDTKKRIERIDAEIASLERESAGGASHDERLLELRGARD
TALAQLAEDEARYEAERVIVAEITELRDALDKARGPSEDGEPVDVSATREKLTERVAALHALQGGEPMVPLQVDGHVVAE
IVAAWTGIPLGRMVKDEIDTVLNLQPLLSARVIGQDHALDAIAQRVRTATANLEDPNKPRGVFMFVGPSGVGKTETALAL
ADILYGGERKMVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGT
MDDAEGREIDFRNTLIILTSNVGSAAVMQACLNKPAEELPDPDALAEALRPQLYKTFKPAFLGRMKVVPYYPISDDVLAE
IIELKLERIRRRIDANHKAAFEWDESLVDAVLARCTEVDSGARNVDHILNGTLLPEIAGHVLGRIADGAAIARIAVRADE
AGEFAYTVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-149 48
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 4e-133 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 5e-133 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bamb_0387 YP_772280.1 ATPase VFG2076 Protein 0.0 54
Bamb_0387 YP_772280.1 ATPase VFG2084 Protein 6e-150 46