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Name : secD (Bamb_0610) Accession : YP_772503.1 Strain : Genome accession: NC_008390 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 681707 - 683728 bp Length : 2022 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGAATCGTTATCCACTCTGGAAATATGTCGTGATGGTCGTGGCGCTCGCCATCGGCTTTCTGTACACATTGCCCAACTT CTTCGGCGAAGCGCCGGCGGTGCAGGTGTCGAGCGGCAAGGCCACGGTCAAGCTCGACTCGACCACGCTGACCCAGGTCG AATCCGCGCTCGCGTCCGCGCAGATCAAGCCGGACGACATCACCTTCGAGAACACGGCGTCCAACGCGAACATCCGCGTG CGCCTGAAGGACACCGATACGCAGCTGCGCGTCAAGGACCTGCTGCAGAAATCGCTGAACGCCGATCCGAACGATCCGCA GTACGTCGTCGCACTGAACCTGCAGAGCGCGTCGCCGCGCTGGCTGACCGCGTTGCACGCGCTGCCGATGTATCTCGGCC TCGACCTGCGCGGCGGTGTCCACTTCCTGCTCCAGGTCGACATGACGGGCGCGCTGACGAAGAAGCTCGACTCCGACGCA TCCGACGCACGCGCGCTGCTGCGCGACCGGAACATCCGCGACGGCGGCGTGAGCCGCGTCGACCAGTCCGTCGTCGTCAA CTTCAGCGATGCGCAAACGGCCGAAGACGCCCGCAAGGTGCTCGCTGCCTCCGTCACCGAACTGCAATGGGCGACCCAGC CCGGCGGCGGCGGCACGCAGGTCGTCGGCACGTTCACGCCGGCCGTGCAGAAGTCCGTCGAGGACGCCGCGCTCAAGCAG AACCTGACGACGCTCCACAACCGCGTGAACGAACTCGGCGTGTCCGAGCCGATCCTGCAGCAGCAGGGCAGCGACCGTAT CGTCGTCGAGTTGCCGGGCGTGCAGGACACCGCGAAGGCGAAGGACATCATCGGCCGCACCGCGACGCTCGAGGCGCGCC TCGCCGATCCGATCAACACGCACCCGAACCCGAACGACCCCGTGCCGCCGGGCGAGGAGCTGTTCACGCAGGGCAACCAG GCGCCTGTGCTGCTGAAGAAGGAAGTGATCTTCACCGGCGACCGCATCATCGATGCGTCGGCCGGCTTCGACGAACACCA GCGTCCGTCGGTCAACATCCGCCTCGACTCGGCGGGCGGCCGCTCGGTGCGCGCGGTGTCGCGCGAGAACATCGGCAAGC CGATGGCGATGGTGCTGTTCGAGAAGGGCAAGGGCGAAGTGCTGACGGTCGCGACGATCCAGTCCGAACTCGGCGACCGC TTCCAGATCACGGGCCAGCCGACGCCGCAGGCAGCGGCCGACCTCGCGCTGCTGCTGCGCGCCGGTTCGCTCGCCGCCCC GATGGACATCATCGAGGAACGCACGATCGGCCCGAGCCTCGGCGCGGACAACATCAAGATGGGCGTCCACTCGGTGATCT GGGGCTTCTGCGCGATCGCCGTGTTCATGATCGCGTACTACATGCTGTTCGGCGTGATTTCGGTGATCGGCCTGTCGGTG AACCTGCTGCTGCTCGTCGCGGTGCTGTCGCTGATGCAGGCGACGCTGACGCTGCCGGGTATCGCGGCAATCGCGCTCGC GCTCGGTATGGCGATCGACTCGAACGTGCTGATCAACGAGCGCGTGCGTGAAGAACTGCGCGCCGGCCAGCCGCCGCAGC TCGCGATCCAGTCCGGCTACGCGCATGCGTGGGCGACGATTCTCGACTCGAACGTCACGACGCTGATCGCCGGCCTCGCG CTGCTCGCGTTCGGCTCGGGCCCGGTTCGCGCGTTCGCGATCGTGCACTGCCTCGGCATCCTGACGTCGATGTTCTCCGC GGTGTTCTTCTCGCGCGGGCTCGTCAACCTCTGGTACGGCGGCCGCAAGAAACTGAAGTCGCTCGCGATCGGCCAGGTGT GGAGGCCGGAAGGCGCCACGGCCGGCGCATCGTTCACCGCGGCCGACGAATCGACCGACACCGCGCGCGCCGCGAAGCTC GCCGCCCCCGCGAAGGGCAACGCATCGCGCGCCGGCAAGCCGCAGCTGCGCAACCGCGCGCAGCAAGGCGTGTCGCCGAA GAAACCGGGCTCGACCCAATAA Protein sequence : MNRYPLWKYVVMVVALAIGFLYTLPNFFGEAPAVQVSSGKATVKLDSTTLTQVESALASAQIKPDDITFENTASNANIRV RLKDTDTQLRVKDLLQKSLNADPNDPQYVVALNLQSASPRWLTALHALPMYLGLDLRGGVHFLLQVDMTGALTKKLDSDA SDARALLRDRNIRDGGVSRVDQSVVVNFSDAQTAEDARKVLAASVTELQWATQPGGGGTQVVGTFTPAVQKSVEDAALKQ NLTTLHNRVNELGVSEPILQQQGSDRIVVELPGVQDTAKAKDIIGRTATLEARLADPINTHPNPNDPVPPGEELFTQGNQ APVLLKKEVIFTGDRIIDASAGFDEHQRPSVNIRLDSAGGRSVRAVSRENIGKPMAMVLFEKGKGEVLTVATIQSELGDR FQITGQPTPQAAADLALLLRAGSLAAPMDIIEERTIGPSLGADNIKMGVHSVIWGFCAIAVFMIAYYMLFGVISVIGLSV NLLLLVAVLSLMQATLTLPGIAAIALALGMAIDSNVLINERVREELRAGQPPQLAIQSGYAHAWATILDSNVTTLIAGLA LLAFGSGPVRAFAIVHCLGILTSMFSAVFFSRGLVNLWYGGRKKLKSLAIGQVWRPEGATAGASFTAADESTDTARAAKL AAPAKGNASRAGKPQLRNRAQQGVSPKKPGSTQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 8e-95 | 43 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-94 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 9e-95 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 8e-95 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 8e-95 | 43 |
