Gene Information

Name : Bamb_3473 (Bamb_3473)
Accession : YP_775361.1
Strain :
Genome accession: NC_008391
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 271254 - 273947 bp
Length : 2694 bp
Strand : +
Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0979 AAA ATPase, Clp

DNA sequence :
ATGACGATTTCACGCCAGGCTCTGTTCGGCAAGCTCGGGGTTCAGCTCTACCGCAGCATCGAATCGGCGACACAGTTCTG
CAAGTTGCGCGGCAATCCGTACGTGGAGCTCATTCACTGGTTGCATCAGCTCCTGCAGCAACCCGATAGCGACCTGCATC
GCATCCTGCGGCACGCGGGCATCGAGCGCGACGTGCTCGATCGCGACTTCGCGCGGGCGTTGGCGGTGCTGCCGGCCGGT
GCCAGTTCAATCAGCGACTTTTCCTGGCACATCGAGACAGCGATCGAACGCGCGTGGGTTCTCGCGACGCTAAGTCATGG
CGATCGCCGTGTGCGCGGCGCGTGGCTCGTTGCTGCGCTTGTCTCGACGCCCGAGTTGAGGCGTGTTCTGCTGTCGATCT
CTCCCGCGTTCGGCAAGATCCCTGTCGACGGGCTGGGCGATGAGCTGCCGGCATGGATCGACGGATCGCCTGAAGCCGCC
GATGCGCCGTACGACCACAGCGACCTTTCGGCGGCAACACCGGGCGAGGCGTCCGGCGCGATTCCAGTCGCATCGAAGCG
TGGTTCGCTCGACCAGTATTGCGCTGACCTGACAGCGCTCGCTCGCATGGGCGAGATCGATCCGGTCATCGGCCGCGAAC
TCGAGATTCGCACGATGATCGACGTGCTGCTGCGCCGTCGGCAGAACAACCCGTTGGTGACGGGTGAGGCCGGTGTTGGC
AAGACGGCCGTCGTGGAAGGGTTGGCGCGCGCGATCGCATCGGGCAATGTGCCGCCGAAGCTTGCCGATGTGCGGCTGCT
GTCGCTCGACGTCGGCGCATTGCTCGCCGGCGCGAGCATGAAGGGGGAGTTCGAAGCGCGTCTGAAAGGGCTGCTCGAAG
CCGCTGGAAAATCGCCGACGCCGGTGATCCTCTTCATCGACGAGATTCACACCCTGATCGGCGCGGGCGGCCAGGCGGGC
ACGGGCGATGCCGCCAATCTGCTGAAACCCGCGCTTGCGCGGGGGACGATCCGTACGATCGGCGCGACGACCTGGGCCGA
GTACAAGCGTCACATCGAGAAGGATCCGGCGCTCACGCGACGCTTCCAGGTGCTGCAGATCGCCGAGCCGTCCGAGGCTG
CTGCCATCGATATGGTGCGCGGGCTTGTGCAAACGTTTTCTCGACATCACGGCGTCGTGGTGCTCGACGAAGCGATCCGT
GCGGCGGTGACGCTGTCACACCGGTATATCCCATCGCGTCAGTTGCCGGACAAGGCCATCAGCCTGCTCGACACCGCCTG
TGCACGTGTGGCGCTGTCGCAGCATGCCACGCCGCGTGAACTGGACGACGTGCGTCAGCGTCTTGCGGCCGCGCGTGCCG
AGGAGGCGTTGCTCGTGCAGGAAGCCCGTATCGGCCTGGATACCGACAGGGCGTTGACGGGCGTGCGAGCGCGCATCGAT
ACATTGGGGGCCGAAGCGGCTGCGGTCGAGCATCGCTGGCGCGCTCAGGCCGCCGCCGCGCAGGCGTTGCTGGCCGCGCG
CGAGGCCATTGGACCCGACGACGGCAAAACCCCGCGGGACGAGGTGGCGGCGCTTCCGAAGCTGCGCGAACTCGAACACG
CGCTCGTTGCGCTGCAAGGCGATGCGCCGCTCGTATTCCCCGAGGTCGACGAGGCGATCGTCGCGGAAATCGTATCCGAT
TGGACCGGCATCCCTGTTGGCCGGATGGTGACTGATGAGGTCGCCGCGGTGCGCAAGTTGCCCGAGACGCTCGAGGCACG
CGTGATTGGCCAGACCAACGCGCTACGTCAAATTGGCGAACGTGTGCAGACCGCACGCGCAGGCCTCACGGACCCGAGGA
AACCGGTCGGCGTGTTCCTGCTCGCCGGTCCGTCGGGCGTCGGCAAGACTGAAACCGCGCTGGCGCTGGCCGAAGCGCTG
TACGGCGGTGAACAGAACCTGATCACGATCAACATGAGCGAGTATCAGGAGGCACACACCGTTTCGGGCCTGAAAGGGGC
TCCGCCGGGGTATGTCGGCTACGGCGAGGGCGGGGTGCTGACCGAGGCGGTGCGCCGCCGTCCGTATTCGGTCGTACTGC
TCGACGAGATCGAGAAGGCCCACCGCGACGTGCACGAGATGTTCTTCCAGGTATTCGACAAGGGCTACATGGAGGACGGC
GACGGCCGCTACATTGATTTCCGCAATACGACGATCCTGCTCACGAGCAACGTCGGTTCCGAACTGAGTACGAGTCTCTG
CGCCGATCCGTCGCTCGCGCCGAATCAGGATGGCCTGCGGGAAGCACTGACGCCCGAACTACTCAAGGTTTTCCCGGCGG
CATTCCTCGGGCGCGTGACCGTCGTGCCCTACCGGCCACTTGCCGACAGCGTACTCGCCAGCATCGTCCGCCTGTATCTG
GAGCGCATCGTCAAGCGTATGGCCGACGGCCACGGCATCGCGCTGACGTATGACGACGCGGTCGTCAATTACATCATCGG
CCGCTGTCTCGTGCAGGAGACCGGTGCGCGCGTGCTGATCGGATTTATCGAGCAGCACGTATTGCCGCGACTGTCCGCAC
TATGGCTCGACGCCTTCGCTTCGAAACGGACACTGTCGCACATCGTGATCGGCGTGGCGGATCCGTCCTGCATGCCGGCG
CAGGCACTCTCGTTTGACGCGATCGCCTTCCATTCAGACGAGCCGGTTCTCTGA

Protein sequence :
MTISRQALFGKLGVQLYRSIESATQFCKLRGNPYVELIHWLHQLLQQPDSDLHRILRHAGIERDVLDRDFARALAVLPAG
ASSISDFSWHIETAIERAWVLATLSHGDRRVRGAWLVAALVSTPELRRVLLSISPAFGKIPVDGLGDELPAWIDGSPEAA
DAPYDHSDLSAATPGEASGAIPVASKRGSLDQYCADLTALARMGEIDPVIGRELEIRTMIDVLLRRRQNNPLVTGEAGVG
KTAVVEGLARAIASGNVPPKLADVRLLSLDVGALLAGASMKGEFEARLKGLLEAAGKSPTPVILFIDEIHTLIGAGGQAG
TGDAANLLKPALARGTIRTIGATTWAEYKRHIEKDPALTRRFQVLQIAEPSEAAAIDMVRGLVQTFSRHHGVVVLDEAIR
AAVTLSHRYIPSRQLPDKAISLLDTACARVALSQHATPRELDDVRQRLAAARAEEALLVQEARIGLDTDRALTGVRARID
TLGAEAAAVEHRWRAQAAAAQALLAAREAIGPDDGKTPRDEVAALPKLRELEHALVALQGDAPLVFPEVDEAIVAEIVSD
WTGIPVGRMVTDEVAAVRKLPETLEARVIGQTNALRQIGERVQTARAGLTDPRKPVGVFLLAGPSGVGKTETALALAEAL
YGGEQNLITINMSEYQEAHTVSGLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHRDVHEMFFQVFDKGYMEDG
DGRYIDFRNTTILLTSNVGSELSTSLCADPSLAPNQDGLREALTPELLKVFPAAFLGRVTVVPYRPLADSVLASIVRLYL
ERIVKRMADGHGIALTYDDAVVNYIIGRCLVQETGARVLIGFIEQHVLPRLSALWLDAFASKRTLSHIVIGVADPSCMPA
QALSFDAIAFHSDEPVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 0.0 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bamb_3473 YP_775361.1 ATPase VFG2076 Protein 0.0 55