Gene Information

Name : Bamb_3805 (Bamb_3805)
Accession : YP_775693.1
Strain :
Genome accession: NC_008391
Putative virulence/resistance : Unknown
Product : shikimate transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2814
EC number : -
Position : 675709 - 677016 bp
Length : 1308 bp
Strand : -
Note : TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1626 citrate-proton symport

DNA sequence :
ATGACACCCACCTTCGATACCCTCGACGCCGCCGCCGGCGCCCGCGCGCGCAGCCAGGCCCGCAAGGCCGCGATCGGCAG
CTTTGTCGGCGCCGTCGTCGACTGGTACGACTTCCTGCTGTACGGGATCGTCGCCGCGCTCGTATTCAATTCGGAATTCT
TCCCGAAGATCAGCCCGACCATGGGCACGCTCGCGGCGTTCGCGACCTTCGGCGTCGGCTTCCTGTTCCGTCCGCTCGGC
GGAGTCGTGTTCGGCCATTTCGGCGACCGCCTCGGCCGCAAGCGGATGCTCGTGCTGACCGTGATGCTGATGGGGCTGTC
GACCGTCGCGATCGGCCTGCTGCCGGGTTTCGCAACGATCGGCTGGTGGGCGCCCGTGCTGCTGGTGCTGATGCGTGCGA
TCCAGGGCTTCGCGGTGGGCGGCGAATGGGGCGGCGCGGCGTTGATGGCCGTCGAGAGCGCGCCGAAGCAGAAGAAGGCG
TTCTACAGCAGCGGCGTGCAGGTCGGCTATGGCGTCGGGCTCGTGCTGGCGACGGGAATCGTGTCGATCCTGAGCCATAC
GCTCGGCGAGGCCGCGTTCAAGTCGTGGGGTTGGCGCCTGCCGTTCGTGTTCAGCATCGTGCTGGTGCTGATCGGGCTGT
GGGTCCGCAAGAGCATGGACGAGTCGCAGGAGTTCGTCGAGAAGGTGGAGCACGGCAACCGCAAGCTGCGCCTGCCGGTG
CTCGAAGCGCTGACGCGCCATCCGAAGGCGTTCCTGCTGATCGTCGCGCTGCGGCTCGCCGAGCTGTTCACGATGTATAT
CGTCACGGCATTCGCGCTCAGCTATTCGACGTCGAACCTGGGCCTGTCGCGCGACCTGTTCCTGAACATCGGCCTGCTGG
TCGGCGCGGTGAGCTGCGTGACGATCCCGTGCTTCGCCTGGCTCGCCGACCGCTTCGGCCTGCGCCGCATCTACCTGATC
GGCGCGGTGATCGGCCTCGTGTCGGCAGTGCCGTTCTTCGTCGCGCTGGAGTCGCGTTCGATCGCGTGGATCGTCGTGTT
CTCGATCCTGTTGGCCAATGCCGCGCACGACATGGTCGTGAGCGTCCAGCAGCCGCTCTTCACCGAGCTGTTCGGCGCGG
AATACCGCTACAGCGGCGCGGGCGTCGGCTATCAGTTCGCGAGTGTGGTCGGCGGCGGGTTCACGCCGTTCATCGCAGTG
GCGCTGGTCAGCATGGCCGGCGGTTCGTGGCACTTCGTCGCCGCTTATCTCGCGGTGGGCTGCCTGATCTCGCTGGTGGT
CGCCGCGCGGATGCGGGCGGCGCAGTGA

Protein sequence :
MTPTFDTLDAAAGARARSQARKAAIGSFVGAVVDWYDFLLYGIVAALVFNSEFFPKISPTMGTLAAFATFGVGFLFRPLG
GVVFGHFGDRLGRKRMLVLTVMLMGLSTVAIGLLPGFATIGWWAPVLLVLMRAIQGFAVGGEWGGAALMAVESAPKQKKA
FYSSGVQVGYGVGLVLATGIVSILSHTLGEAAFKSWGWRLPFVFSIVLVLIGLWVRKSMDESQEFVEKVEHGNRKLRLPV
LEALTRHPKAFLLIVALRLAELFTMYIVTAFALSYSTSNLGLSRDLFLNIGLLVGAVSCVTIPCFAWLADRFGLRRIYLI
GAVIGLVSAVPFFVALESRSIAWIVVFSILLANAAHDMVVSVQQPLFTELFGAEYRYSGAGVGYQFASVVGGGFTPFIAV
ALVSMAGGSWHFVAAYLAVGCLISLVVAARMRAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1067 YP_853084.1 shikimate transporter Not tested PAI IV APEC-O1 Protein 5e-136 74