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Name : RPE_1085 (RPE_1085) Accession : YP_780018.1 Strain : Rhodopseudomonas palustris BisA53 Genome accession: NC_008435 Putative virulence/resistance : Virulence Product : type I secretion system ATPase Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 1229279 - 1231396 bp Length : 2118 bp Strand : + Note : KEGG: bja:bll6293 HlyB/MsbA family ABC transporter; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter, transmembrane region; ABC transporter related; peptidase C39, bacteriocin processing; SMART: AAA ATPase DNA sequence : ATGCTGGCGTGTACTGATCAGGGCGCATGGTGTTTGGCGTTCGCGCTGCGCTTGCTCGGGATTGTGGTCGATGCCGACAA GCTGAAGCACGAGTCCGGGCAGTCCAGTGCCTTGACGGCTGACGATATTCTACGTGCGATCAAAACGTTTCCGATCAAAG CGAAGCTGGCCTCGGTGCCGGTCGAGCGGCTGGGCAAAATGCCCGTCCCGGCGTTGGCGGTCATGCGCGACGGGGGCTTC TGCGTTCTCGGGAAGGTAACGGAAGATTCCGTTCTGATCCAGGGGCCGGCTGATTCAGGACCTCGGCTTCTGAAGTTTCC GGATTTCGACAAGGAATGGTCGGGCAAGCTCATCCTGCTCGCTAAGCGCGCCGACCTGCAGGATGCTGCGCGTCGATTCA GTCTTGCGTGGTTCTGGGGCGCACTGACCAAGTATCGGCGTATCCTTGTCGAGGTACTCGTCGCATCCTTTGTTATCCAG CTATTTGCGCTGGCCACGCCGATGATCTTCCAGACGGTCATCGACAAGGTATTGGTTCATCGGGGCTTTTCGACCCTTGA GGTCATGGTCGCGGGCCTCATGCTCATCGCAGTTTTCGAGGCCGTGCTGTCGGGTTTGCGCACCTATCTCTTCTCTCATA CCAGCAATCGGGTCGACGTTGAACTCGGGTCTCGGCTGTTCCGCCATCTGATGCGGCTGCCGTTGGCATATTTCGAGAGC CGCCGGGTCGGCGACAGCGTCGCGCGTGTGCGTGAGCTTGAAACAATCCGGAATTTCATCACGAGTTCGTCTATCACGCT GGTGCTTGATCTGGCGTTTTGCGTCATCTTCATCGCTGTGATGTTCGTATACAGCGCGCCGCTTGCCTGGATCGTGACGG CGGCGCTCCCGCTCTACGCGCTACTCTCGGTGGTAACGACGCCAGCGTTTCGCAGCCGGCTGAACGAGAAGTTCCGGCGT GGCGCGGAAAATCAGGCATTCTTGGTTGAAAGCATAACGGGGATCGAGACGATCAAGGCGATGGCCGTCGAACCGCAGAT GCAGCGGCGATGGGAAGAGCAACTGGCCTCCTATGTCGGCTCGTCGTTTTCGGCCTCTCAGGTCGGGAATTGGGCTACTC AGGTGGCTAATCTCCTCAACAAGATCATTTCTGCGTTGACGCTGTTCATTGGCGCCGGGCTTGTAATCGACAATAAGTTG ACGGTCGGTGAGCTAGTTGCGTTCAATATGCTTGCATCACAAGTGAGCAGTCCTGTCTTGCGTCTTGTTCAAGTGTGGCA GGATTTCCATCAGGTGAGGCTCTCGGTCGAGCGGCTGGGTGACATTCTCAACACCCCGGTCGAGACCAGTAGCGCATCGA GCCAAGCCAAGCAGCAACGGGTTAGTGGTGCTGTCGAGTTCGAAAGGGTCACTTTCAGGTATTCGGTGACTGGCCAACCG GTCCTGCGCGACGTCAGCTTGAAGGTCCCGGCCGGTCAGGTTGTCGGCATCGTTGGTCCATCGGGGTCGGGCAAGAGCAC GCTCGCGAAGCTCGCACAACGCCTGTACCAGCCTGAAGCGGGACGTGTGTTGATTGATGGCGTCGACGTCACGGTCCTCG ATCCCTCATGGCTTCGCCGGCAGATCGGTGTGGTTTTGCAGGAGAACATTCTATTCAATCGCACCGTCCGCGAGAACATC GCGCTGGCCGATCCAGCACTGCCGATGGAGCAGGTAGAGGCTGCCGCGGCCCTTGCCGGAGCGCACGATTTCATCTGTAA GATGCCGCAAGGCTACGACACGATGATTGGTGAGCGCGGCGTGTCCCTATCCGGGGGACAACGTCAACGCATTGCGATCG CCCGCGCGCTCGTGGGTGATCCTCGCATTCTGATTTTCGATGAGGCGACCTCGGCGCTCGACTACGAGTCGGAAAGTATC ATCCAGGCTAACATGCGCAACATTGTGCAGGGACGCACGGTATTGATCATTGCTCACCGGTTATCGACCGTTCGCGGCGC TGATCGAATTCTTACGATCGAGGACGGTGTGATCATCGAGGACGGAACCCACGACCAACTGGTCGGGAGCGGCGGCCGCT ACGCCACGCTCCATTCAATTCAATCGGTTGGTCGGTAG Protein sequence : MLACTDQGAWCLAFALRLLGIVVDADKLKHESGQSSALTADDILRAIKTFPIKAKLASVPVERLGKMPVPALAVMRDGGF CVLGKVTEDSVLIQGPADSGPRLLKFPDFDKEWSGKLILLAKRADLQDAARRFSLAWFWGALTKYRRILVEVLVASFVIQ LFALATPMIFQTVIDKVLVHRGFSTLEVMVAGLMLIAVFEAVLSGLRTYLFSHTSNRVDVELGSRLFRHLMRLPLAYFES RRVGDSVARVRELETIRNFITSSSITLVLDLAFCVIFIAVMFVYSAPLAWIVTAALPLYALLSVVTTPAFRSRLNEKFRR GAENQAFLVESITGIETIKAMAVEPQMQRRWEEQLASYVGSSFSASQVGNWATQVANLLNKIISALTLFIGAGLVIDNKL TVGELVAFNMLASQVSSPVLRLVQVWQDFHQVRLSVERLGDILNTPVETSSASSQAKQQRVSGAVEFERVTFRYSVTGQP VLRDVSLKVPAGQVVGIVGPSGSGKSTLAKLAQRLYQPEAGRVLIDGVDVTVLDPSWLRRQIGVVLQENILFNRTVRENI ALADPALPMEQVEAAAALAGAHDFICKMPQGYDTMIGERGVSLSGGQRQRIAIARALVGDPRILIFDEATSALDYESESI IQANMRNIVQGRTVLIIAHRLSTVRGADRILTIEDGVIIEDGTHDQLVGSGGRYATLHSIQSVGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 2e-169 | 51 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 2e-169 | 50 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 2e-169 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RPE_1085 | YP_780018.1 | type I secretion system ATPase | VFG0841 | Protein | 8e-169 | 52 |
| RPE_1085 | YP_780018.1 | type I secretion system ATPase | VFG1269 | Protein | 5e-178 | 52 |
| RPE_1085 | YP_780018.1 | type I secretion system ATPase | VFG0907 | Protein | 7e-170 | 51 |
| RPE_1085 | YP_780018.1 | type I secretion system ATPase | VFG1557 | Protein | 9e-170 | 50 |
| RPE_1085 | YP_780018.1 | type I secretion system ATPase | VFG1501 | Protein | 9e-170 | 50 |
