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Name : RPE_1934 (RPE_1934) Accession : YP_780858.1 Strain : Rhodopseudomonas palustris BisA53 Genome accession: NC_008435 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2145118 - 2147100 bp Length : 1983 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: rpc:RPC_1836 cytochrome c-type biogenesis protein CcmF DNA sequence : GTGATCGCCGAAGCGGGTCACTACGCGCTGGTGCTGGCGCTGGCGCTGGCGCTGATCCAATCGATCGTGCCGGTGGTCGG CGCCAAGCTGCGCGACCCCGCGCTGATGAATGTCGGTCGATCCACCGCGCTGGCGCAGCTGCTGTTCGTCGGCGCGTCGT TCACCGCGCTGACGGTGCTGTACATCACCTCGGACTTTTCCGTCGTCAACGTGTTCGAGAACTCGCATTCCCAGAAGCCG CTGCTCTACAAGATCAGCGGCGTGTGGGGCAACCATGAAGGCTCGATGCTGCTGTGGGTGTCGATCCTGGCGCTGTTCGG CGGCATGGTCGCGGCCTTCGGCAACAATCTGCCGCTGACGCTGCGCGCCTATGTGCTGGCCGTGCAGGGCTGGATCGCCA GCGCGTTCTATCTGTTCATCCTGATCACCTCGAATCCGTTCCTGCGAACCGCGACCCCGCCGCTGGAAGGCCGCGACCTC AATCCGATCCTGCAGGACATCGGGCTCGCGATCCATCCGCCGATGCTCTATCTCGGCTATGTCGGGTTCTCGATCTCGTT CTCCTTCGCGATCGCCGCGCTGATCGAAGGCCGCGTCGACGCCGCCTGGGCGCGCTGGGTGCGGCCGTGGACGCTCGTGG CGTGGATATTCCTCACCCTCGGCATCGCGATGGGTTCGTATTGGGCCTACTACGAACTCGGCTGGGGCGGCTGGTGGTTC TGGGACCCGGTCGAAAACGCCTCGCTGATGCCCTGGCTTGCCGGCACCGCGCTGCTGCATTCCGCGGTGGTGATGGAGAA GCGCAACGCGCTGAAGGTCTGGACCATCCTGCTGTCGATCCTGACCTTCTCGCTGTCGCTGCTCGGCACCTTCCTGGTGC GCTCCGGCGTCTTGACCTCGGTGCACGCCTTCGCCACCGACCCGACCCGCGGCGTCTTTATTCTCTTGATCCTCTGCGCC TTCATCGGCGGCAGCCTCGCCCTCTATGCCGCGCGCGCCTCGTCGCTGAAGCAGGGCGGGCTGTTCGCGCCGATCTCGCG CGAAGGCGCGCTGGTGCTGAACAATCTGTTCCTCACCACCGCCACCGCCACGGTGTTTATCGGCACGCTCTATCCGTTGG CGCTCGAAGTGATGACCGGCGACAAGATCTCGGTCGGCGCGCCGTTCTTCAATCTCACCTTCGGCCCGCTCTGCGTGCCG CTGCTACTCGCAGTGCCGTTCGGGCCGCTGTTGGCCTGGAAGCGCGGCGATCTTTTGGGCGCGGCGCAACGGCTGATCGC GGCGGGCGTCGCGGCGCTGATCGTGGTGGCGTTGCTGTGGGCGTTCGTGCACGGCGGCAGCACGCTGGCGCCGCTGGCGA TCGGGCTCGCGGTGTTCGTCATTGTTGGCGCGTTGGTCGACCTGGTCGAGCGCATCGGCCTGTTCAGGAATCCGCTCGGT ATCGCCTGGCGCCGTGCCCGCGGCCTGCCGCGCGCCACCTGGGGAACCGCCTTTGCGCACGCCGGAGTCGGCGTGGCGCT GATCGGCATCGTCTGCGAGACCACCTGGAACAGCGAATACATCGCCACCATGAAGCCGAACGACACCACCATGGTCGCCG GCTATCAGGTCAAGCTCGATACGCTGTCGCAGCGGCAGGGGCCGAATTTTCGCGAGATGTTCGCCTCGTTTTCGGTGAGC CAGGACGGGCAGCTGCTCAGCACGATGGTGCCGTCGAAGCGCAGCTTCCAAACGCGCGGCATGTCGACCTCGGAAGCCGC CTTGCTGACGCGCGGCGTCAGCCAGCTCTACATCTCGCTCGGTGAGCCGACCGCCGACGGCGGCATCGCGGTGCGGGTTT ATCACAAGCCTTGGGTGCTACTGATCTGGTACGGCCCGCTGTTGATGGCGTTCGGCGGTCTGTTGTCGCTGTCCGATCGA CGACTGCGCGTCGGCGCGCCAAAACCAGCAAAACAGGCCCGCGCGTTGCAGGCTGCGGAATAG Protein sequence : MIAEAGHYALVLALALALIQSIVPVVGAKLRDPALMNVGRSTALAQLLFVGASFTALTVLYITSDFSVVNVFENSHSQKP LLYKISGVWGNHEGSMLLWVSILALFGGMVAAFGNNLPLTLRAYVLAVQGWIASAFYLFILITSNPFLRTATPPLEGRDL NPILQDIGLAIHPPMLYLGYVGFSISFSFAIAALIEGRVDAAWARWVRPWTLVAWIFLTLGIAMGSYWAYYELGWGGWWF WDPVENASLMPWLAGTALLHSAVVMEKRNALKVWTILLSILTFSLSLLGTFLVRSGVLTSVHAFATDPTRGVFILLILCA FIGGSLALYAARASSLKQGGLFAPISREGALVLNNLFLTTATATVFIGTLYPLALEVMTGDKISVGAPFFNLTFGPLCVP LLLAVPFGPLLAWKRGDLLGAAQRLIAAGVAALIVVALLWAFVHGGSTLAPLAIGLAVFVIVGALVDLVERIGLFRNPLG IAWRRARGLPRATWGTAFAHAGVGVALIGIVCETTWNSEYIATMKPNDTTMVAGYQVKLDTLSQRQGPNFREMFASFSVS QDGQLLSTMVPSKRSFQTRGMSTSEAALLTRGVSQLYISLGEPTADGGIAVRVYHKPWVLLIWYGPLLMAFGGLLSLSDR RLRVGAPKPAKQARALQAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 6e-98 | 46 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-78 | 45 |
