Gene Information

Name : RPE_0478 (RPE_0478)
Accession : YP_779417.1
Strain : Rhodopseudomonas palustris BisA53
Genome accession: NC_008435
Putative virulence/resistance : Virulence
Product : twin-arginine translocation pathway signal
Function : -
COG functional category : R : General function prediction only
COG ID : COG2041
EC number : -
Position : 527375 - 528154 bp
Length : 780 bp
Strand : +
Note : TIGRFAM: Twin-arginine translocation pathway signal; PFAM: oxidoreductase, molybdopterin binding; KEGG: rpb:RPB_0333 twin-arginine translocation pathway signal

DNA sequence : 
ATGCTCCGTAAGAAATCGCTGCTGATCCCCGGTGTCGACAAGCAACTGCTGGTGCGCGATGCCACAAGACTGCTGCCGGA
AGTGTCGCGGCGGCGCTTTCTCGCCGGCGGCGCCAGCCTCGGTGCGCTGACGCTGCTCACCGGCTGCGACGTGGTTGATT
CGGCTTCCGCCGAGAATCTGCTGGTGCAGATGTCGAAGTTCAACGATGCGGTGCAGGCGGCGATCTTCGATCCGAACACG
CTGGCGCCGACCTATTCCGAAAGCGAGATCAAGCGGCCGTTTCCGTTCAACGCCTATTACACGCTGGACGAATCGCCGGC
CATCGACGGCCAGGATTGGAAGCTGGAGGTCTCGGGGCTGGTCGACAACAAGCAGTCCTGGACGCTCGAAGAGCTCTATC
GGCTGCCGCAGCTGAAACAGATCACCCGCCACATCTGCGTCGAAGGCTGGAGCGCGATCGGCTCCTGGAGCGGCACGCCG
CTGCGCGATTTCCTGAGTCGCATCGGTGCCGACACCAAGGCGAAATTCGTCTGGTTCCGCTGCGCGGAAGGCTACACCTC
GTCGATCGACATGCCGACCGCGCTGCATCCGCAAACCCAGATGAGCTTCAAATTCGACGACCAGATCCTACCGCGCGCCT
ATGGTTTTCCGATGAAAATTCGCGTTCCGACCAAACTCGGCTTCAAGAATCCGAAATACGTCGTCTCGCTGGAGGTCACT
AACGACTACAAGGGCGGCTATTGGGAGGACCAGGGCTACAATGATTTCAGCGGCCTGTAG

Protein sequence : 
MLRKKSLLIPGVDKQLLVRDATRLLPEVSRRRFLAGGASLGALTLLTGCDVVDSASAENLLVQMSKFNDAVQAAIFDPNT
LAPTYSESEIKRPFPFNAYYTLDESPAIDGQDWKLEVSGLVDNKQSWTLEELYRLPQLKQITRHICVEGWSAIGSWSGTP
LRDFLSRIGADTKAKFVWFRCAEGYTSSIDMPTALHPQTQMSFKFDDQILPRAYGFPMKIRVPTKLGFKNPKYVVSLEVT
NDYKGGYWEDQGYNDFSGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42042.1 hypothetical protein Not tested PAI II 536 Protein 1e-63 53
c3567 NP_755442.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-62 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPE_0478 YP_779417.1 twin-arginine translocation pathway signal VFG1561 Protein 9e-64 53
RPE_0478 YP_779417.1 twin-arginine translocation pathway signal VFG1704 Protein 2e-62 52