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Name : fecI (PA14_13460) Accession : YP_789221.1 Strain : Pseudomonas aeruginosa UCBPP-PA14 Genome accession: NC_008463 Putative virulence/resistance : Virulence Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 1157864 - 1158373 bp Length : 510 bp Strand : - Note : Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : GTGTCGAGCGCCGACCTCGCCCATGCGGCCGCGTTGCATACCCTCTACAGCGACCACCACCACTGGCTCACGGGCTGGCT GCGGCGCCGCCTCGGCTGCCCGCAGAACGCCGCCGACCTGGCCCAGGACACCTTCGTCAAGGTCCTGGTTTCGCGCCAGG CCGCGCGCATCGACGAACCGCGCGCCTTCCTCACCACCATCGCCCGCCGCGTGCTGTGCAACCACTACCGCCGCCAGGAC GTCGAGCGCGCCTACCTGGAAGCCCTGGCCAGCCTGCCCGAGCGGGAAGTCCCCAGCGAAGAGACCCGCGCCATCGTCCT GGAGACCCTGGTCGAGCTGGACCGTCTGCTCGACGGCCTGCCGCCGCTGGCCAAGGAGACCTTCCTGCTGGCCCAGCTCG ACGGCCTGGGCTACGCCGAGATCGCCACGCAGCTGGGCATCTCCCTGAGCAGCGTCAAGCGCTACATGCTCAAGGCTGCG CAACGCTGCTACTTCGCCGAGCTGCCATGA Protein sequence : MSSADLAHAAALHTLYSDHHHWLTGWLRRRLGCPQNAADLAQDTFVKVLVSRQAARIDEPRAFLTTIARRVLCNHYRRQD VERAYLEALASLPEREVPSEETRAIVLETLVELDRLLDGLPPLAKETFLLAQLDGLGYAEIATQLGISLSSVKRYMLKAA QRCYFAELP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 8e-37 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fecI | YP_789221.1 | RNA polymerase sigma factor | VFG1049 | Protein | 3e-37 | 53 |
