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Name : secD (PA14_14630) Accession : YP_789311.1 Strain : Pseudomonas aeruginosa UCBPP-PA14 Genome accession: NC_008463 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1247545 - 1249407 bp Length : 1863 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGCTCAACAAGTATCCTCTGTGGAAATATCTGCTGATCCTGGCGGTCCTCGCCGTCGGGTTCATCTATTCCGCACCCAA CCTCTACCCGGACGACCCGGCGGTGCAGATCAGCGGCGCCAGCACGGCGCTGCAGGTCACCCAGGCCGACGTCGACCGCG CTGCCAAGGCGCTGACCGACGCCGGTATCGCGGTGAAGGCCAACAGCCTGTCGAAGAAGGGCGGCCTGATCCGCCTGGTC AAGCAGGACGACCAGCTTCCCGCCAAGGAAGTGGTGCGCCGGACCCTGGGCGACGACTACGTGGTGGCGCTGAACCTGGC CCAGACCACTCCCGAGTGGCTGCGCAAGCTGGGCGGCAGCCCAATGAAGCTCGGCCTGGACCTGTCCGGCGGCGTGCACT TCCTGCTGGAAGTGGACATGGACAAGGCGGTCGATGCCCGCCTGAAGGTCTATGAAAGCGAAGTGAAGAGCCTGCTGCGC AAGGAGCGCGTGCGCTACCGCAGCCTGCCGATCCAGGATCGCGCGATCCAGCTCGGCTTCACCGACAGCGAATCCCTGGA CAAGGCGCGCAGCCTGATCGCCAAGGACTTCCGCGATTTCGAGGTCGTGCCCGAAGAGCGCAACGGCCTGCAGGTCCTGC GTGTCGCCCTGACCCAGGCCAAACTGGCGGAAATCCGCGAGTACTCCATCAAGCAGAACCTCACCACCGTCCGCAACCGG GTCAACGAGCTGGGCGTATCCGAGCCGCTGGTGCAGCGCCAGGGCGCCAATCGCATCGTGGTCGAGCTGCCGGGCGTGCA GGACACCGCGGAAGCCAAGCGAATCCTCGGCAAGACCGCCAACCTCGAATTCCGCCTGGCCGCCGAGCCGGACGCCCTGA AGTCCGCCACCGAGACCTTCGAGTTCCGCGAGCCGCGCCGTCCGCCGGTGCCGCTGGAGCGCGGGGTGATCATCACCGGC GACCAGGTCACCGACGCCAGCGCCAGTTTCGACGAGAACGGCCGCCCGCAGGTGAACATCCGCCTGGATGGCCACGGCGG CGAGCTGATGAACCGCGCCACCCGCAACAACGTCGGCCGCAGCATGGCGGTGGTGTTCATCGAGCAGAAGCCGGTGACCC GCTACACCAAGCAGATGGTCGATGGCGTCGAGAAGGAGGTCGCGGTTCCGGCGTTCAAGGAAGAGAAGCAGATCATCAGT CTGGCGACCATCCAGTCGCCGCTGGGCAACCAGTTCCGCATCACCGGCCTCGATGGCCCGGGCGAGTCCTCCGAACTGGC CCTGCTGCTGCGTGCCGGCGGCCTGGCTGCACCGATGTACTTCGCCGAAGAACGCACCATCGGCCCGAGCCTGGGGGCGG ACAACATCGCCAAGGGTGTCGATGCGTCGCTCTGGGGCATGCTCTTCGTATCGCTGTTCATCATCGTCATCTACCGTTTC TTCGGCGTGATCGCCACCGTTGCGCTGGCCTTCAACATGGTCATGCTGGTAGCGCTGATGTCGATCCTCGGCGCGACCCT GACCCTGCCGGGCATCGCCGGTATCGTGCTGACCATGGGCATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGGATAC GCGAGGAGCTGGCCAATGGCATGTCGGTCCAGAGGGCGATCCACGAAGGCTTCAACCGTGCCTTCACCGCGATCCTCGAC GCCAACCTGACCTCGCTGCTGGTCGGCGGCATCCTCTACGCCATGGGCACCGGCCCGGTGAAAGGATTTGCCGTGACCAT GTCGCTCGGCATCATCACCTCGATGTTCACGGCCATCATGGTCACCCGCGCAATGGTCAACCTGATCTTCGGCGGGCGTG ACTTCAAGAAGCTGTGGATCTAA Protein sequence : MLNKYPLWKYLLILAVLAVGFIYSAPNLYPDDPAVQISGASTALQVTQADVDRAAKALTDAGIAVKANSLSKKGGLIRLV KQDDQLPAKEVVRRTLGDDYVVALNLAQTTPEWLRKLGGSPMKLGLDLSGGVHFLLEVDMDKAVDARLKVYESEVKSLLR KERVRYRSLPIQDRAIQLGFTDSESLDKARSLIAKDFRDFEVVPEERNGLQVLRVALTQAKLAEIREYSIKQNLTTVRNR VNELGVSEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRLAAEPDALKSATETFEFREPRRPPVPLERGVIITG DQVTDASASFDENGRPQVNIRLDGHGGELMNRATRNNVGRSMAVVFIEQKPVTRYTKQMVDGVEKEVAVPAFKEEKQIIS LATIQSPLGNQFRITGLDGPGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNIAKGVDASLWGMLFVSLFIIVIYRF FGVIATVALAFNMVMLVALMSILGATLTLPGIAGIVLTMGMAVDANVLIFSRIREELANGMSVQRAIHEGFNRAFTAILD ANLTSLLVGGILYAMGTGPVKGFAVTMSLGIITSMFTAIMVTRAMVNLIFGGRDFKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 84 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 84 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 84 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 84 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 84 |
