Gene Information

Name : glcB (PA14_06290)
Accession : YP_788655.1
Strain : Pseudomonas aeruginosa UCBPP-PA14
Genome accession: NC_008463
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : 2.3.3.9
Position : 554958 - 557135 bp
Length : 2178 bp
Strand : -
Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA

DNA sequence :
ATGACTGAACGCGTTCAAGTCGGTGGCCTGCAGGTCGCCAAAGTCCTGTTCGACTTCGTGAACAACGAAGCCATCCCCGG
AACCGGCGTCTCTGCCGACACGTTCTGGACCGGTGCGGAGGCCGTGATCAACGACCTGGCGCCGAAGAATAAAGCCCTGC
TCGCCAAGCGCGACGAACTCCAGGCCAAGATCGACGGCTGGCACCAGGCTCGCGCCGGCCAGGCCCACGACGCCGCTGCC
TACAAGGCCTTCCTCGAGGAAATCGGCTACCTGCTGCCCGAGGCGGAAGACTTCCAGGCCGGCACCCAGAACGTCGACGA
CGAGATCGCCCGCATGGCCGGCCCGCAGCTGGTGGTGCCGGTGATGAATGCGCGCTTCGCCCTGAACGCCTCCAACGCCC
GCTGGGGCTCGCTGTACGACGCACTCTACGGCACCGACGTGATCAGCGAAGAAGGCGGCGCCGAGAAAGGCAAGGGCTAC
AACAAGGTTCGCGGCGACAAGGTCATCGCCTTCGCTCGCGCCTTCCTCGACGAGGCCGCGCCGCTGGAGTCCGGCTCCCA
TGTCGACGCCACTTCCTACAGCGTGAAGAACGGCGCGCTGGTCGTCGCGCTGAAGAACGGCAGCGAAACCGGCCTGAAGA
ACGCTGGCCAGTTCCTTGCCTTCCAGGGCGACGCCGCCAAGCCGCAAGCGGTACTGCTCAAGCACAACGGCCTGCACTTC
GAAATCCAGATCGACCCGAGCAGCCCGGTCGGCCAGACCGATGCCGCAGGCGTGAAGGACGTGCTGATGGAAGCCGCCCT
CACCACCATCATGGACTGCGAGGACTCGGTCGCCGCGGTCGACGCCGACGACAAGGTAGTGATCTACCGCAACTGGCTGG
GCCTGATGAAAGGCGACCTGGCCGAGGAAGTCAGCAAGGGCGGCAGCACCTTCACCCGCACCATGAACCCGGACCGCGTC
TACACCAGGGCCGACGGTTCCGAACTGACCCTGCACGGCCGCTCGCTGCTGTTCGTGCGCAACGTCGGCCACTTGATGAC
CAACGATGCGATCCTCGACAAGGACGGCAACGAAGTGCCGGAAGGCATCCAGGACGGTCTGTTCACCAGCCTGATCGCCA
TTCATGACCTGAACGGCAACACCAGCCGCAAGAACAGCCGCACCGGCAGCGTGTATATCGTCAAGCCGAAGATGCACGGT
CCGGAAGAAGCCGCCTTCACCAACGAGCTGTTCGGCCGCGTCGAGGACGTCCTCGGCCTGCCGCGCAACACCCTGAAGGT
CGGCATCATGGACGAGGAGCGCCGCACCACCGTGAACCTGAAGGCCTGCATCAAGGCGGCCAAGGATCGCGTGGTGTTCA
TCAACACCGGCTTCCTCGACCGCACCGGCGACGAGATCCACACCTCCATGGAAGCCGGCGCCGTGGTGCGCAAGGGCGCC
ATGAAGTCGGAGAAGTGGATCGGCGCCTACGAGAACAACAACGTCGACGTCGGCCTGGCCACCGGCCTGCAAGGCAAGGC
GCAGATCGGCAAGGGCATGTGGGCCATGCCCGACCTGATGGCCGCCATGCTCGAGCAGAAGATCGGCCATCCGCTGGCCG
GCGCCAACACCGCCTGGGTCCCGTCGCCGACCGCCGCGACCCTGCACGCCCTGCATTACCACAAGGTCGACGTGTTCGCC
CGCCAGGCCGAGCTGGCCAAGCGCACCCCGGCCTCGGTGGACGACATCCTGACCATTCCGCTGGCGCCGAACACCAACTG
GACCGCGGAAGAGATCAAGAACGAGGTGGACAACAACGCCCAGGGCATCCTCGGCTATGTCGTCCGCTGGATCGACCAGG
GCGTCGGCTGCTCCAAGGTGCCGGACATCAACGACGTCGGTCTGATGGAAGACCGCGCCACCCTGCGCATCTCCAGCCAG
CTGCTGGCCAACTGGCTGCGTCACGGCGTGATCAGCCAGGAGCAGGTGGTCGAGAGCCTCAAGCGCATGGCCGTGGTGGT
CGACCGGCAGAACGCCAGCGACCCGTCCTACCGGCCGATGGCGCCGAACTTCGACGACAACGTCGCGTTCCAGGCCGCCC
TGGAGCTGGTGGTGGAAGGCACCCGGCAGCCGAACGGCTATACCGAGCCGGTCCTGCATCGCCGCCGCCGTGAGTTCAAG
GCGAAGAACGGGCTGTAG

Protein sequence :
MTERVQVGGLQVAKVLFDFVNNEAIPGTGVSADTFWTGAEAVINDLAPKNKALLAKRDELQAKIDGWHQARAGQAHDAAA
YKAFLEEIGYLLPEAEDFQAGTQNVDDEIARMAGPQLVVPVMNARFALNASNARWGSLYDALYGTDVISEEGGAEKGKGY
NKVRGDKVIAFARAFLDEAAPLESGSHVDATSYSVKNGALVVALKNGSETGLKNAGQFLAFQGDAAKPQAVLLKHNGLHF
EIQIDPSSPVGQTDAAGVKDVLMEAALTTIMDCEDSVAAVDADDKVVIYRNWLGLMKGDLAEEVSKGGSTFTRTMNPDRV
YTRADGSELTLHGRSLLFVRNVGHLMTNDAILDKDGNEVPEGIQDGLFTSLIAIHDLNGNTSRKNSRTGSVYIVKPKMHG
PEEAAFTNELFGRVEDVLGLPRNTLKVGIMDEERRTTVNLKACIKAAKDRVVFINTGFLDRTGDEIHTSMEAGAVVRKGA
MKSEKWIGAYENNNVDVGLATGLQGKAQIGKGMWAMPDLMAAMLEQKIGHPLAGANTAWVPSPTAATLHALHYHKVDVFA
RQAELAKRTPASVDDILTIPLAPNTNWTAEEIKNEVDNNAQGILGYVVRWIDQGVGCSKVPDINDVGLMEDRATLRISSQ
LLANWLRHGVISQEQVVESLKRMAVVVDRQNASDPSYRPMAPNFDDNVAFQAALELVVEGTRQPNGYTEPVLHRRRREFK
AKNGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 60