Gene Information

Name : LVIS_1609 (LVIS_1609)
Accession : YP_795717.1
Strain : Lactobacillus brevis ATCC 367
Genome accession: NC_008497
Putative virulence/resistance : Virulence
Product : propanediol utilization protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1572873 - 1573163 bp
Length : 291 bp
Strand : -
Note : similar to carboxysome shell protein CcmK

DNA sequence : 
ATGAATAACGCATTAGGTATGATCGAAACCAAGGGTTTAGTTGCCTCAATCGAAGCGGCAGATGCCATGGTTAAAGCAGC
AAACGTTGAAATGATGGGTCAAGAAAAGATCGGTAGTGGTTTGGTAACGGTCATGGTTCGTGGTGACGTTGGTGCCGTTA
AAGCCGCCGTTGATGCTGGGGTTGCTGCCGCTGAAAACATTGGTGAAGTCCAAAGCTCATTCGTTATTCCTCGTCCACAC
GCAGAAGTTGAAAACATCTTACCTAAGACGAGCAAACCAGCTGCAAAATAA

Protein sequence : 
MNNALGMIETKGLVASIEAADAMVKAANVEMMGQEKIGSGLVTVMVRGDVGAVKAAVDAGVAAAENIGEVQSSFVIPRPH
AEVENILPKTSKPAAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-15 71
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 7e-17 69
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-17 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LVIS_1609 YP_795717.1 propanediol utilization protein VFG1596 Protein 5e-16 71
LVIS_1609 YP_795717.1 propanediol utilization protein VFG1597 Protein 3e-17 69
LVIS_1609 YP_795717.1 propanediol utilization protein VFG1598 Protein 1e-17 67