Gene Information

Name : LVIS_1617 (LVIS_1617)
Accession : YP_795725.1
Strain : Lactobacillus brevis ATCC 367
Genome accession: NC_008497
Putative virulence/resistance : Virulence
Product : propanediol utilization protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1579691 - 1579969 bp
Length : 279 bp
Strand : -
Note : similar to carboxysome shell protein CcmK

DNA sequence : 
ATGGAACAAGAAGCACTCGGATTAATCGAAACAAAGGGTTTAGTTGCTGCAATTGAAGCCGCCGATGCAATGGTCAAGGC
CGCTAACGTTGATTTAGTGGGACAAGAAAAGATCGGTCATGGTTTGGTAACGACAATGGTTCGTGGTGACGTTGGTGCTG
TGAAGGCCGCTGTTGATGCTGGTGTTGCTGGCGCTGAAAACATTGGTGAAGTTCTATCTAGCTACGTTATTCCACGTCCT
CACACTGATGTTGAAAAGATTTTACCTCAAAAGAAATAG

Protein sequence : 
MEQEALGLIETKGLVAAIEAADAMVKAANVDLVGQEKIGHGLVTTMVRGDVGAVKAAVDAGVAGAENIGEVLSSYVIPRP
HTDVEKILPQKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-17 72
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 6e-17 70
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-16 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LVIS_1617 YP_795725.1 propanediol utilization protein VFG1596 Protein 2e-17 72
LVIS_1617 YP_795725.1 propanediol utilization protein VFG1597 Protein 2e-17 70
LVIS_1617 YP_795725.1 propanediol utilization protein VFG1598 Protein 2e-16 67