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Name : clpA-1 (LBJ_1611) Accession : YP_800929.1 Strain : Genome accession: NC_008510 Putative virulence/resistance : Virulence Product : endopeptidase Clp, ATP-dependent proteolytic subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1895177 - 1897756 bp Length : 2580 bp Strand : - Note : cytoplasmic protein DNA sequence : ATGAAACTAGATAAACTCACTGCAAAATTAAATGAAGCGTTGCATAACGCACAAGTTTCTGCCGAGAAGTCGGGAAATCC GGAAATCAGTGAAGAACACATTCTTAGAGAAGTTTTGGTCCAGACCGACGGACTTGTCCCACTTTTGATTTCAAAACTTA ACCTAAATCCGAAATCCTTTCTCGAAAAAACCGAAGACGCACTGAGGCGGCTTCCGAAAGTCGGAGGAACTTCTTCCGCT GATGTGGGATTCTCACGTTCCGCAGTTTCTCTTTTGAAAACTGCGGATGAAATCCGTAGGGAACTAAAAGACGAGTATTT ATCAACGGACCATGTAATTCTCGGGCTTATGAAAAATGGAGTCGGACCGTTGAAGGAGGAATTTTTAAAACTAGGATTAG AATATTCTAAATTACTTAATATTACTTTGGAGAATAGAAAGGGAAAGGCAATCATGGACGATTCACCGGAAGGAAAAATG GACGCTCTTGCAAAGTATGCAAAAAATCTTAACGACCTCGCCAAACAGGGAAAACTTGATCCTGTTATCGGAAGAGACGA AGAGATAAGAAGGACGATTCAAGTCCTCTCCAGAAGAACGAAAAATAACCCGGTTCTTATCGGAGAACCCGGAGTAGGTA AGACTGCGATCGTAGAAGGACTTGCGAACAAGATCGTACAAGGGGAGGTTCCGGAAGGAATCAGGAATAAAACTCTTTAT ACCCTGGACCTAGGTTCCATGATCGCGGGAGCCAAATACAGAGGGGAGTTTGAAGACAGATTGAAAGCCCTTCTCGACGA GGTTAAGGCTTCGGACGGCGAGGTTATTTTATTTATAGACGAAATTCATACTCTTGTAGGCGCCGGCGCAACGGAAGGTG CATTAGACGCTTCTAATATGCTGAAGCCGATGCTTGCCAGAGGAGAACTCCGATGTATCGGTGCTACCACTCTGAAAGAA TATCAGAAATACATTGAAAAGGACGCCGCATTGGAAAGAAGGTTTCAACCCGTTTACGTTAAAGAACCTTCCGTCGAGGA AACGGTTACGATCTTAAGAGGACTCAAAGGACGTTACGAGCTCCATCATGGAATTCGAATTCTTGATTCCGCGTTGATCG CGGCGGCTACCCTTTCCAATCGGTATATCGTCGACCGTTTCCTTCCCGATAAAGCGGTGGATTTGATCGACGAGGCGTCT TCTAAGATGAGGATCGAGATCGACTCCATGCCGGAAGAATTGGATCGCGCGAGTAAACGGATTCAATCCTTAAAAATCGA AAGAGAGGCGTTGAAAAAAGAACAGGATCCCGCTTCGAAAGAAAGATTGAAATCACTCGAAAAGGATCTTGCGGAACAAG AGCAGAATTTTCAGACTTTGAAGGCGAGATGGGATTTGGAAAAATCCAAAATCTTACGATTGAAACAAATTAAGGAAGAG ATCGAAAAGTATAAAAACTTAGAAGCGGACGCGGAAAGAAAAGGAGAAATCAATCGAGTCGCCGAAATCCGCTACGGAAA ACTAGTCGATTTACAAAAAGAATTCGAAGCCGCAAACGAAGAATTAAAAAAACAAGAAGGGGCCTCTCGGCTTTTGAAAG AAGAAGTCTCCGAAGAAGACATTGCGAACATCGTTTCTCGTTGGACCGGGATTCCCGTATCCAAAATGCTTCAAGGGGAA AGAGCAAAACTTCTTTTGATGGAAGACGCTTTGAAGACAAGGGTTATCGGCCAGGATCACGCTCTCAAACTTGTATCTGA AGCGGTACAAAGATCAAGGGCTGGGATTGCGGATCCGAATCGACCGATTGGAACTTTCTTATTCCTGGGACCTACGGGAG TTGGAAAAACGGAAACCGCAAAGGCTCTCGCCGAATTCTTGTTCGACGATGCAAATGCGATGCATCGAATCGATATGAGC GAGTATATGGAAGCGCATTCTGTTGCGCGACTTATCGGAGCGCCGCCCGGTTATGTGGGATACGACGAAGGGGGACAACT CACCGAAGCGGTGAGAAGAAGGCCATATTCTCTGATTCTATTCGACGAAGTTGAAAAAGCGAACCCGGATGTATTCAACA TTTTTCTTCAAATTTTGGACGAAGGTAGATTAACCGATGGAAAGGGGCGTAACGTTGATTTCAAGAACACGGTGATCATT CTCACTTCCAATATCGGATCGGACATTTTGGGTTCTTCCGAATATAGCGCCGAAGAAAAAGAAAGATTAGTCGAAGAACG TTTGAAAAAACAATTCAAACCCGAATTCTTAAACCGAATCGACGAAGTGATTCTATTTCATTCAATTTCAAATTCCGTGA TTCACAAAATTGCAGACATTCAGTTGGAGGCGTTGAAACAAAAGGCGAAGGAGAACGGTTTGGATGTTCAGTTTACAGAC GAATTGAAGGACTATGTTTCTAGAGCAGGTTTTGATGCCGAATACGGAGCTAGACCTCTGAAACGTTTGATCCAAAGAGA AGTTGGCAACTCTCTCAGTCGCTACATTTTAAATGGTAAATTTTCGGACGGACAAAAAGTGACTGTGGATTATAGACAGG GAAAAGTGATCGTAATTTAA Protein sequence : MKLDKLTAKLNEALHNAQVSAEKSGNPEISEEHILREVLVQTDGLVPLLISKLNLNPKSFLEKTEDALRRLPKVGGTSSA DVGFSRSAVSLLKTADEIRRELKDEYLSTDHVILGLMKNGVGPLKEEFLKLGLEYSKLLNITLENRKGKAIMDDSPEGKM DALAKYAKNLNDLAKQGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLANKIVQGEVPEGIRNKTLY TLDLGSMIAGAKYRGEFEDRLKALLDEVKASDGEVILFIDEIHTLVGAGATEGALDASNMLKPMLARGELRCIGATTLKE YQKYIEKDAALERRFQPVYVKEPSVEETVTILRGLKGRYELHHGIRILDSALIAAATLSNRYIVDRFLPDKAVDLIDEAS SKMRIEIDSMPEELDRASKRIQSLKIEREALKKEQDPASKERLKSLEKDLAEQEQNFQTLKARWDLEKSKILRLKQIKEE IEKYKNLEADAERKGEINRVAEIRYGKLVDLQKEFEAANEELKKQEGASRLLKEEVSEEDIANIVSRWTGIPVSKMLQGE RAKLLLMEDALKTRVIGQDHALKLVSEAVQRSRAGIADPNRPIGTFLFLGPTGVGKTETAKALAEFLFDDANAMHRIDMS EYMEAHSVARLIGAPPGYVGYDEGGQLTEAVRRRPYSLILFDEVEKANPDVFNIFLQILDEGRLTDGKGRNVDFKNTVII LTSNIGSDILGSSEYSAEEKERLVEERLKKQFKPEFLNRIDEVILFHSISNSVIHKIADIQLEALKQKAKENGLDVQFTD ELKDYVSRAGFDAEYGARPLKRLIQREVGNSLSRYILNGKFSDGQKVTVDYRQGKVIVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-109 | 41 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 5e-101 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-101 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA-1 | YP_800929.1 | endopeptidase Clp, ATP-dependent proteolytic subunit | VFG0079 | Protein | 3e-149 | 43 |
