Gene Information

Name : Acid_0505 (Acid_0505)
Accession : YP_821800.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 616837 - 619446 bp
Length : 2610 bp
Strand : -
Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: pca:Pcar_0359 ATPase with chaperone activity, two ATP-binding domains

DNA sequence :
ATGGACTTCAATCGTTTCACTGAGAAGCTACAGGAAGCGGTGCGGGCGGCGCAGAGCATCGCTGCCCGCCACGGTCATCA
ACAGGTGGACGTGGAGCATTTGCTGGCGGCCCTGCTGGAGCAGGAAGGCGGGCTCACGGCATCGATTCTGACGCGCGCGG
GCGTCAATGTGGACGCGCTCAAGCGACGCATTGAGGGTGAACTCGACCGGCTACCGAAGGTATCGGGCTCGGCCGCCGGG
ATCGATCAGATCTACGTGACGCCGCGCTTGAACAAGCTGCTGACGCAGGCCGAGGACGAGGCCAAGAAGCTGAAGGACGA
GTACGTTTCGGTGGAGCATGTGCTGCTGGCCGCCGTGGATATGAAAGATTTAGGGGTGCCGCGCGACCGGCTGCTGCAGG
CGCTGCGCGAGGTGCGAGGCAGCCAGCGGGTGACGTCACAGAATCCGGAAGGGACTTACGAAGCGCTCGAAAAATATGGG
CGTGACCTGACGGTGGCGGCCGCGACCAACAAGCTGGACCCGGTGATCGGGCGCGACGACGAGATCCGCCGTGTGATCCA
GGTACTCTCGCGGCGCACCAAGAACAACCCGGTGCTGATCGGCGAGCCGGGCGTGGGCAAGACGGCGATCGTGGAAGGGC
TGGCGGTGCGCATTGTGCGCGGGGACGTGCCGGAGGGCCTCAAGAACAAGCGCGTGGTGGCGCTCGATATGGGCGCGCTG
ATCGCCGGCGCCAAGTATCGCGGCGAATTCGAAGAGCGGCTGAAGGCGGTGCTCAAAGAGGTGCTGGACGCCGCCGGCGA
GATCATCCTGTTCATTGACGAGCTGCATACCGTGGTGGGCGCGGGAAAGACCGAGGGGTCGATGGACGCGGGCAATCTGC
TGAAGCCGATGCTGGCGCGCGGCGAGCTGCATTGCATCGGCGCGACGACGCTCGATGAATATCGCAAGTACATCGAGAAG
GACGCAGCGCTGGCGCGGCGCTTCCAGCCGGTCATGGTGGACCAGCCCTCGGTGGAAGACACAATCTCGATTTTGCGCGG
CTTGAAGGAACGCTACGAGGTGCATCACGGCGTGCGCATCAAGGACGCGGCGCTGGTAGCGGCGGCGGTGCTGAGCGACC
GCTACATCACGGACCGGTTTCTGCCGGACAAGGCGATCGACCTGGTGGACGAGTCGGCGGCACGGCTGCGCACCGAGATC
GATTCGATGCCGGTGGAGCTCGACGAAACACGGCGGCGGATCATGCAGCTCGAGATCGAACGCGAGGCGCTGCGCAAGGA
GAAGGACAAGGCTTCGAAGGAACGGCTGACCAAGCTGGAGAAAGAACTGGCCGATTTGAAGGCCGAATCGGATGAGCTGA
TGGCTCGCTGGCAGGCCGAGAAGGACGAGGTGCAGCGGCTGCGGACGCTGCGCGAGCAGGTGGAACAGACCAAACTGGAG
ATCGGCCAGGCGGAGCGGCAGTACGATCTGAATCGCGCGGCTGAATTGAAGTACGGCAAGCTGGCGCAACTGGAGCGGCA
GCTGGCGGAGGCGGAGAAGGCGAGCAAGCAGCAGGGCGGTCCGCGGCTAATCAAGGAAGAAGTGGACGAGGAGGATATCG
CGGCGGTGGTGAGCCGGTGGACGGGGGTGCCGGTGACCAAGCTGCTGGAAGGGGAGATGCAGAAGCTGCTGCACCTGGAA
GAAGAGCTGCACAAGCGGGTGATCGGCCAGGATGAGGCCGTGACGGCGGTCGCGGAGGCGGTGATCCGCGCACGGTCGGG
CTTGAAGGATCCGCAGCGCCCGATCGGCAGCTTCATATTCATGGGTCCGACCGGCGTGGGCAAGACCGAACTGGCGCGCG
CGCTGGCCGAGTACATGTTCGACGACGAGCATGCCATGATCCGCATCGACATGTCCGAGTACCAGGAGAAGCATACGGTG
AGCCGCCTGGTGGGGGCGCCTCCGGGCTATGTGGGCTACGACGAAGGCGGCCAGTTGACCGAGGCGGTGCGGCGGCGGCC
CTACTCGGTGATCCTGTTCGATGAAATCGAGAAGGCGCACCACGATGTGTTCAACGTGCTGCTGCAGGTGCTGGACGATG
GGCGCCTGACGGACGGGCAGGGGCGCACGGTGGACTTCAAGAACACGATTGTGATCATGACCTCTAACGTAGGCAGCGCG
CGTATTCTCGAATATCAGGGCGCCTACTCCGGCGCGGGGTTCGAAAGGATGAAAGAGGCGGTGCTGGAGGAGATGAGGCG
CCAATTCCGGCCGGAGTTCCTCAACCGCGTGGACGAAATTATCGTCTTCCACGCGCTCAGCGAGGAGGATCTGAAGAAGA
TCGTGGAGATCCAACTCGGCCGCCTGCGCGCACGGCTCGCCGACCGGCACATCACGCTGGAGTTGACCGACGCGGCGCGC
GCCAACCTGGTGCACACCGGCTACGATCCGCACTATGGCGCGAGGCCGTTAAAGCGCGCCATCCAGAAGAAGATCGAGAC
GCCGCTGGGCAGACAACTCATCCAGGGCGCGATTAGAGACGGCCAGGTGGTGAAGGTGGACGCCACCGGGGACAGCGGCG
ACCTCTCGTTCACGGTGGAACAACGAGAGAGAGAACCCGCCGCGCCATAG

Protein sequence :
MDFNRFTEKLQEAVRAAQSIAARHGHQQVDVEHLLAALLEQEGGLTASILTRAGVNVDALKRRIEGELDRLPKVSGSAAG
IDQIYVTPRLNKLLTQAEDEAKKLKDEYVSVEHVLLAAVDMKDLGVPRDRLLQALREVRGSQRVTSQNPEGTYEALEKYG
RDLTVAAATNKLDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAVRIVRGDVPEGLKNKRVVALDMGAL
IAGAKYRGEFEERLKAVLKEVLDAAGEIILFIDELHTVVGAGKTEGSMDAGNLLKPMLARGELHCIGATTLDEYRKYIEK
DAALARRFQPVMVDQPSVEDTISILRGLKERYEVHHGVRIKDAALVAAAVLSDRYITDRFLPDKAIDLVDESAARLRTEI
DSMPVELDETRRRIMQLEIEREALRKEKDKASKERLTKLEKELADLKAESDELMARWQAEKDEVQRLRTLREQVEQTKLE
IGQAERQYDLNRAAELKYGKLAQLERQLAEAEKASKQQGGPRLIKEEVDEEDIAAVVSRWTGVPVTKLLEGEMQKLLHLE
EELHKRVIGQDEAVTAVAEAVIRARSGLKDPQRPIGSFIFMGPTGVGKTELARALAEYMFDDEHAMIRIDMSEYQEKHTV
SRLVGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHHDVFNVLLQVLDDGRLTDGQGRTVDFKNTIVIMTSNVGSA
RILEYQGAYSGAGFERMKEAVLEEMRRQFRPEFLNRVDEIIVFHALSEEDLKKIVEIQLGRLRARLADRHITLELTDAAR
ANLVHTGYDPHYGARPLKRAIQKKIETPLGRQLIQGAIRDGQVVKVDATGDSGDLSFTVEQREREPAAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 6e-166 45
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 5e-102 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 4e-102 43
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-108 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid_0505 YP_821800.1 ATPase VFG2076 Protein 6e-118 44