Gene Information

Name : Arth_0887 (Arth_0887)
Accession : YP_830385.1
Strain : Arthrobacter sp. FB24
Genome accession: NC_008541
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 959571 - 960338 bp
Length : 768 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: nfa:nfa32290 putative short chain dehydrogenase

DNA sequence : 
ATGAGCATTTTCCCCTCAGAACGCACAGCAATCGTCACCGGAGCCGTCTCCGAGCGCGGCATCGGCCGGGCCACCGTCAA
CTACCTCGCAGCGCAGGGCTGGAACATCGGCATCATCGACCTGGACGACGCCCTGTGCAAGGCCGCAGCCAAGGAACTGG
CCGCCCAGTATGGTGTCCGGGCCCTCGGGGTTGGAGCCAACGTTGCCGATGAAACTTCCGTCCGCAATGCAATCGACGAG
ATCGAAGCAGAGCTGCCGCAGATCGTGGCCCTGGCCAACGTGGCCGGCGTCAGTTCACCGGTGCCGTACCTGGAGCTGGA
CGCTGCCGAGTGGGACCGCGTGCTGAACATCAACCTCAACGGCGTCCATTACGCCACCCGCCGCGTGGCCGAATCCATGG
TCAAGAACCGGATCGGGCGCATCGTCAACATCTCCTCCGTTTCCGCACAGCGGGGCGGCGGCACGTTCTCCAAAACGCCG
TACTCGGTGGCAAAGGCCGGCGTGATCGGACTGACCCGCTCCACCGCCCGCGAACTGGGGGAGTACGACATCACCGTCAA
CGCCATCTCCCCGGGCCCCATCGACACCGACATCATGGGCGGCACGCTCAGCCAGGAACGCAAGGACGAACTCACCAAGG
ACCTTGTGGTCAACCGGGTCGGATCGACACGCGACATCGCAGCAGCCATCGCCTTCCTCATCAGCGAGGACGCCGGATAC
ATCTCCGGCCAGACGCTGAATGTGGATGGCGGACTTTACATGCACTAG

Protein sequence : 
MSIFPSERTAIVTGAVSERGIGRATVNYLAAQGWNIGIIDLDDALCKAAAKELAAQYGVRALGVGANVADETSVRNAIDE
IEAELPQIVALANVAGVSSPVPYLELDAAEWDRVLNINLNGVHYATRRVAESMVKNRIGRIVNISSVSAQRGGGTFSKTP
YSVAKAGVIGLTRSTARELGEYDITVNAISPGPIDTDIMGGTLSQERKDELTKDLVVNRVGSTRDIAAAIAFLISEDAGY
ISGQTLNVDGGLYMH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 3e-37 43
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 4e-37 42
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-37 42
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-37 42
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 7e-38 42