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Name : secD (Bcen2424_0720) Accession : YP_834366.1 Strain : Genome accession: NC_008542 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 800400 - 802421 bp Length : 2022 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGAATCGTTATCCACTCTGGAAATATGTCGTGATGGTCGTGGCGCTCGCCATCGGCCTTCTGTACACATTGCCCAACTT CTTCGGCGAAGCGCCGGCGGTGCAGGTGTCGAGCGGCAAGGCCACGGTCAAGCTCGACTCGACCACGCTGACCCAGGTCG AATCGGCACTCGCGTCCGCGCAGATCAAGCCGGACGACGTCACCTTCGAGAACACGGCGACCAGCGCGAACATCCGCGTG CGCCTGAAGGACACCGATACGCAGCTGCGCGTCAAGGACCTGCTGCAGAAGTCGCTGAATGCCGACCCGAACGATCCGCA GTACGTCGTCGCACTGAACCTGCAGAGCGCGTCGCCGCGCTGGCTGACCGCCCTGCACGCGCTGCCGATGTATCTCGGCC TCGACCTGCGCGGCGGCGTGCACTTCCTGCTCCAGGTCGACATGACGGGCGCGCTCACGAAGAAGCTCGACTCCGACGCG TCCGACGCGCGCTCGCTGCTGCGCGACAAGAACATCCGCGACGGCGGCGTGAGCCGCGTCGAGCAGTCCGTGGTCGTCAA CTTCAGCGATGCGCAGACGGCGGAAGACGCCCGCAAGGTGCTCGCCGCGTCGATCACCGAGCTGCAATGGGCGACCCAGC CCGGCGGCGGCGGCACGCAAGTCGTCGGCACCTTCACGCCGGCCGTGCAGAAGTCGGTCGAGGACGCCGCGCTCAAGCAG AACCTGACGACGCTCCACAACCGCGTGAACGAGCTCGGCGTGTCCGAGCCGATCCTGCAGCAGCAAGGCAGCGACCGCAT CGTCGTCGAACTGCCGGGCGTGCAGGACACCGCGAAGGCGAAGGACATCATCGGCCGCACCGCGACCCTCGAGGCGCGCC TGGCCGACCCGATCAACACGCACCCGAACCCGAACGACCCCGTGCCGCCGGGCGAGGAGCTGTTCACGCAAGGCAACCAG GCGCCCGTGCTGCTGAAGAAGGACGTGATCTTCACCGGCGACCGCATCATCGACGCATCGGCCGGCTTCGACGAACACCA GCGTCCGTCGGTCAACATCCGCCTCGACTCGGCGGGCGGCCGCGCGGTGCGCACGGTGTCGCGCGACAACATCGGCAAGC CGATGGCGATGGTGCTGTTCGAGAAGGGCAAGGGCGAAGTGCTGACGGTCGCGACGATCCAGTCCGAGCTCGGCGACCGC TTCCAGATCACGGGCCAGCCGACGCCGCAGGCCGCGGCCGACCTCGCGCTGCTGCTGCGCGCCGGCTCGCTCGCGGCGCC GATGGACATCATCGAGGAACGCACGATCGGCCCGAGCCTCGGCGCCGACAACATCAAGATGGGCGTGCACTCGGTGATCT GGGGCTTCTGCGCGATCGCCGTGTTCATGATCGCGTACTACATGCTGTTCGGCGTGGTGTCGGTGATCGGGCTGTCGGTG AACCTGCTGCTGCTCGTCGCCGTGCTGTCGCTGATGCAGGCGACGCTGACGCTGCCCGGTATCGCGGCCATCGCGCTCGC GCTCGGTATGGCGATCGACTCGAACGTGCTGATCAACGAGCGCGTGCGCGAAGAACTGCGCGCCGGCCAGCCGCCGCAGC TCGCGATCCAGGCCGGCTACGCGCATGCGTGGGCGACGATTCTCGACTCGAACGTCACGACGCTGATCGCCGGTCTCGCG CTGCTTGCGTTCGGTTCGGGCCCGGTTCGCGCGTTCGCGATCGTGCACTGCCTCGGCATCCTGACGTCGATGTTCTCCGC GGTGTTCTTCTCGCGCGGGCTCGTCAACCTCTGGTACGGCGGCCGCAAGAAGCTGAAGTCGCTCGCGATCGGCCAGGTGT GGAAGCCGGAAGGCGCCGCTGCCGCCGCGTCGTTCACCGACGAGGACGAATCGACCGACACCGCGCGCGCCGCGAAGCTC GCCGCCCCGGCGAAGGGCAACGCGCCGCGCGCCGGCAAGCCGCAGCTGCGCAACCGCGCGCAGCAAGGCGTGTCGCCGAA GAAACCGGGCTCGACCCAATAA Protein sequence : MNRYPLWKYVVMVVALAIGLLYTLPNFFGEAPAVQVSSGKATVKLDSTTLTQVESALASAQIKPDDVTFENTATSANIRV RLKDTDTQLRVKDLLQKSLNADPNDPQYVVALNLQSASPRWLTALHALPMYLGLDLRGGVHFLLQVDMTGALTKKLDSDA SDARSLLRDKNIRDGGVSRVEQSVVVNFSDAQTAEDARKVLAASITELQWATQPGGGGTQVVGTFTPAVQKSVEDAALKQ NLTTLHNRVNELGVSEPILQQQGSDRIVVELPGVQDTAKAKDIIGRTATLEARLADPINTHPNPNDPVPPGEELFTQGNQ APVLLKKDVIFTGDRIIDASAGFDEHQRPSVNIRLDSAGGRAVRTVSRDNIGKPMAMVLFEKGKGEVLTVATIQSELGDR FQITGQPTPQAAADLALLLRAGSLAAPMDIIEERTIGPSLGADNIKMGVHSVIWGFCAIAVFMIAYYMLFGVVSVIGLSV NLLLLVAVLSLMQATLTLPGIAAIALALGMAIDSNVLINERVREELRAGQPPQLAIQAGYAHAWATILDSNVTTLIAGLA LLAFGSGPVRAFAIVHCLGILTSMFSAVFFSRGLVNLWYGGRKKLKSLAIGQVWKPEGAAAAASFTDEDESTDTARAAKL AAPAKGNAPRAGKPQLRNRAQQGVSPKKPGSTQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-94 | 42 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 9e-95 | 42 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 9e-95 | 42 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 9e-95 | 42 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 8e-95 | 42 |
