Gene Information

Name : APECO1_r17 (APECO1_r17)
Accession : -
Strain : Escherichia coli APEC O1
Genome accession: NC_008563
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4488381 - 4489946 bp
Length : 1566 bp
Strand : +
Note : -

DNA sequence : 
AAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAGC
AGCTTGCTGCTTTGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCCGATGGAGGGGGATAACTACTGGA
AACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGACCTTAGGGCCTCTTGCCATCGGATGTGCCCAGAT
GGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTG
GAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCACCCAT
GCCCCGTGTATGAAGAAGGCCTTCCGGGTTGTAAAGTACTTTTCAACGGGGGAGGAAGGGGAGTAAAGTTAATACCTTTG
CTCATTGACGTTACCCGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAA
TCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATGTGAAATCCCCGGGCTCAACCTGGGAACTGC
ATCTGATACTGGCAAGCTTGAGTCTCGTAGAGGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGG
AATACCGGTGGCGAAGGCGGCCCCCTGGACGAAGACTGACGCTCAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATA
CCCTGGTAGTCCACGCCGTAAACGATGTCGACTTGGAGGTTGTGCCCTTGAGGCGTGGCTTCCGGAGCTAACGCGTTAAG
TCGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGG
TTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGACATCCACGGAAGTTTTCAGAGATGAGAATGTGCCTTCGGG
AACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCC
TTATCCTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGT
CAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCATACAAGAGAAGCGACCTCGCCGAGAGCA
AGCGGACCTCATAAAGTGCGTCGTAGTCCGGGATTTGGAGTCTGCAACTCGACTCCATTGAAGTCGGAATCCCTAGGTAA
TCGTGGATCAGAATGCCACCGGGTGAAATACGTTCCCGGCCTTGTACCCACCGCCCGTCACACCATGGGAGTGGGTTGCA
AAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAA
CCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGC

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-147 87.5
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-147 87.5
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-147 87.5
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-147 87.5
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-147 87.4
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-147 87.4