Gene Information

Name : AHA_1354 (AHA_1354)
Accession : YP_855893.1
Strain : Aeromonas hydrophila ATCC 7966
Genome accession: NC_008570
Putative virulence/resistance : Virulence
Product : RTX toxin transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 1472972 - 1475131 bp
Length : 2160 bp
Strand : -
Note : identified by similarity to GB:AAF94603.1; match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01846

DNA sequence :
ATGCAGCAGACCCACGCCGCCGACAGCGCCCCTGTCGCCAATGGCGCCCTCGCCGCCCTCACCCACGCAGCGCACCAGCT
GATGCTGACGGCCGATGCCGAACAGCTGGCCCACGCCCTGGGGTGCGATCTGGCACCGCCCGATCTGACGGTGCGGGAAG
CCGCTGCCCGTCTTGGCCTGCGCAGCGCCCTGTCGCAGGGGCCGGGCTGCCCGCTCGCGGCGCTGCCGCTGCCGACCTTG
CTCAAGCGGGATGGCCGCTGGTACACCATCACCGCCATCACGCCAGAGGGCTGGCTGCTGTTTGATCCCGCCAGCGGCAG
CAGCGGGCAGCAACCGCTGCCGAGCCAGGCCGAGGCGGCGCAGTGGCACTTTCTGTTGCTGGCCCAGCAGGATCTCACCC
AAGCCGAGGTCAAATTCGGGCTGAGCTGGTTCAGCCCGGCGGTGCTGCGCCAGCAGAAACAGCTGCGGGACGTCTTCTGT
TTCGCCATCTTGCTGCAGCTCATCGCCCTCGCCAGTCCGCTGCTGTTCGAGAACATCATCGACAAGGTGCTGGTGGGGCG
CAGCCTCGGCAGTCTGCACGTGCTGGCCCTGGCCATGGTGGCACTGGCCTGCGCCGAGCCGCTCTACGGCTTTCTGCGCG
GCCAGGTGTTCGGTCACCTGGCCAACCAGGTCAATGCCGAGCTCTCCGGCAAGCTCTATCGCCATCTGGTCGGCCTGCCC
ATCGGCTATTTCAAGGCCCGCCAGACCGGCCAGATCATCGCCCGGGTCAAGGAGATGGCCCAGATCCGCCAGTTCCTCAC
CGGCTCGACCCTGATGCTGGTGCTGGATCTGCTGTTCATCCTGCTGTTCGTCGGGGTCATGTTTCACTACGCCCCGCGCC
TGACCGCCTGCGTGCTGGGCTCGCTGCTGATCTACTTCCTGCTCTGGCTGCTGATAGGGCCGCTGGTGCGCAGAAAGGTC
GAGGCGGAGTATCAGGCGGATGCCGATGCCACCAGCTTTCTGACCGAGGCGGTCACCGGCATCGAAACCATCAAGACCAC
GGCCACCGAACGCCGCTTCTACCAGGAGTGGCAGCGCCTGCTGGCACGCCAGCTCAGACGGGGCTTTCAGGCCAAAAAGG
TGGGGTTGGCGGCCGGCCAGGGCATCGATCTGGTGCAAAAACTCACCGCCGCCCTGCTGCTCTGGCTCGGGGTCGGCGAG
GTACTGAACGGTCGCATGAGCCCGGGGGAACTGGTCGCCTTCAACATGCTGGCCGGCCACGTCACCCAGCCGGTGCTGCG
CCTGGCCCAGGTGTGGCAGGATTTTCAGCACACCCTGATCGCCCTGCGCCGGGTCGGCGACATCCTCGACGAGGCGCCGG
AGCATGGCAACAACGGGCTCGCCTCCGTGCCCGCCCTCCAGGGTGCCATCGAGTTTCGCCACATCCGCTTTCGTTACCAG
CCGGATGCCCCCGAGGTGCTGGCCAACCTCTCCCTCACCATTGAGCCGGGGCAGTTCATCGGCATCACGGGGCCGTCCGG
CTGCGGCAAGAGCACCCTGACCCGTTTGCTGCAGCGGCTCTATGTGCCTCAGCACGGCCAGGTACTGGTGGACAACATGG
ATCTCGCCATCGCCGACCCCGTCTCCCTGCGCCGCAACATGAGCGTGGTGCTGCAGGAGAGCGTGCTGTTCTCCGGCACC
ATCGCCGACAACATCCGCATCTGCCGCCCCGATGCCACCCAGGCCGAACTGGAGCAGGCGGCGCAGCTGGCCGGTGCCCT
CGCCTTCATTCGCGAGCTGCCCCATGGCTTCGAGCAACAGGTAGGAGAGAAGGGAGCCCGCTTGTCGGGCGGCCAGCGCC
AGCGCATTGCCCTGGCCCGCGCCCTGCTGGTCAACCCCAGGATCCTGCTGCTCGACGAGGCCACCTCGGCCCTCGACTAT
GAGTCGGAAGCGGCCATCATGGCCAACATGGCGGCCATCCGCCGCGGCCGCACCCTCATCAGCATCGCCCATCGCCTCAA
TACCCTGCGCGAAGCGGACCGTATCCTGGTGATGGAGGCAGGGCAGATAGTGGAGTCGGGCAGCCATGATGAACTGCTGG
CCCGCGAGGGGCTCTATGCCAGGCTGTGGCGTCAGCAGACCGGAGCTGAGACAAGTCAGACCCTGACTCACACTGGCTAG

Protein sequence :
MQQTHAADSAPVANGALAALTHAAHQLMLTADAEQLAHALGCDLAPPDLTVREAAARLGLRSALSQGPGCPLAALPLPTL
LKRDGRWYTITAITPEGWLLFDPASGSSGQQPLPSQAEAAQWHFLLLAQQDLTQAEVKFGLSWFSPAVLRQQKQLRDVFC
FAILLQLIALASPLLFENIIDKVLVGRSLGSLHVLALAMVALACAEPLYGFLRGQVFGHLANQVNAELSGKLYRHLVGLP
IGYFKARQTGQIIARVKEMAQIRQFLTGSTLMLVLDLLFILLFVGVMFHYAPRLTACVLGSLLIYFLLWLLIGPLVRRKV
EAEYQADADATSFLTEAVTGIETIKTTATERRFYQEWQRLLARQLRRGFQAKKVGLAAGQGIDLVQKLTAALLLWLGVGE
VLNGRMSPGELVAFNMLAGHVTQPVLRLAQVWQDFQHTLIALRRVGDILDEAPEHGNNGLASVPALQGAIEFRHIRFRYQ
PDAPEVLANLSLTIEPGQFIGITGPSGCGKSTLTRLLQRLYVPQHGQVLVDNMDLAIADPVSLRRNMSVVLQESVLFSGT
IADNIRICRPDATQAELEQAAQLAGALAFIRELPHGFEQQVGEKGARLSGGQRQRIALARALLVNPRILLLDEATSALDY
ESEAAIMANMAAIRRGRTLISIAHRLNTLREADRILVMEAGQIVESGSHDELLAREGLYARLWRQQTGAETSQTLTHTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 3e-111 48
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 2e-111 46
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 2e-111 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AHA_1354 YP_855893.1 RTX toxin transporter VFG0907 Protein 1e-111 48
AHA_1354 YP_855893.1 RTX toxin transporter VFG1269 Protein 6e-113 48
AHA_1354 YP_855893.1 RTX toxin transporter VFG0841 Protein 4e-107 47
AHA_1354 YP_855893.1 RTX toxin transporter VFG1557 Protein 1e-111 46
AHA_1354 YP_855893.1 RTX toxin transporter VFG1501 Protein 1e-111 46