Gene Information

Name : ccmE (AHA_1397)
Accession : YP_855936.1
Strain : Aeromonas hydrophila ATCC 7966
Genome accession: NC_008570
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmE
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2332
EC number : -
Position : 1529061 - 1529552 bp
Length : 492 bp
Strand : +
Note : identified by match to protein family HMM PF03100

DNA sequence :
ATGAACCCGAGACGCAAGAAACGCCTCACCATCATCCTGGCGATCAGTGCCGGGCTTGCCGCGGTGATCGGCCTAGTGCT
CTATGCCCTCAGCCAGAACATTGATCTCTTCTATACCCCGAGCGAGCTGGTGGAGGGCAAGGGCCCGGACAAGATCAAGC
CGGAAGAGGGACAGCGCCTGCGCATCGGCGGTCTGGTGGTGCCGGGTTCGGTACAGCGGGATCCCCAGAGCCTCAAGGTG
GCCTTCAAGCTGGTGGACAACGGCGGGCATCTGGTGACCGTCGAGTTTGACGGCATCCTGCCGGATCTGTTCCGCGAGGG
GCAGGGCATCGTCGCCCAGGGCACCCTCAAGGATGCAACCACGGTCGCCGCCTTCGAGGTGCTGGCCAAACACGATGAGA
ACTACATGCCGCCGGAAGTGGCCGATGCCACCAACGGCATGCACTTCAAGCCGGAATATACCGAGGCGCAGCTGAAGGGG
AGCAAGCAATGA

Protein sequence :
MNPRRKKRLTIILAISAGLAAVIGLVLYALSQNIDLFYTPSELVEGKGPDKIKPEEGQRLRIGGLVVPGSVQRDPQSLKV
AFKLVDNGGHLVTVEFDGILPDLFREGQGIVAQGTLKDATTVAAFEVLAKHDENYMPPEVADATNGMHFKPEYTEAQLKG
SKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmE YP_217242.1 cytochrome c-type biogenesis protein CcmE Not tested SPI-12 Protein 2e-38 61
cycJ / ccmE AAN62107.1 putative cytochrome C-type biogenesis protein CycJ Not tested PAGI-2(C) Protein 2e-21 41