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Name : ccmF-1 (AHA_1398) Accession : YP_855937.1 Strain : Aeromonas hydrophila ATCC 7966 Genome accession: NC_008570 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1529635 - 1531590 bp Length : 1956 bp Strand : + Note : identified by match to protein family HMM PF01578; match to protein family HMM TIGR00353 DNA sequence : ATGATCCCTGAATTGGGACAGTTTTCACTGATCCTGGCCTTCGCCACCGCCCTGCTGCTGGGCAGCTATCCGCTGCTCGG GGCCAAATGGGGGCGCCTTGGCATGATGTCGGCGGCCCGCCCGCTGGCCTATGCCCAGTTCCTGCTGCTGTTGCTGTCGT TCCTGTGCCTGACCTGGGCCTTCATCGACAACGACTTTACCGTGCAGTACGTGGCCACCAACTCCAACAGCCTGCTGCCG CTGGCCTATCGCATCTCCGCGGTGTGGGGCGCCCATGAAGGTTCGCTGCTGCTGTGGGTGCTGACCCTGGGAGGCTGGAC TGCGGCCGTCGCCATGTTCAGCCGTCGCCTGCCGCTCGACGCGGTGGCGCGGGTGCTCGGCGTGCTCGGCCTCATCTCGG TCGGTTTTACCGCCTTCGTGCTGTTTACCTCCGACCCCTTCATTCGTACCTTGCCCTACTTCCCGGTAGATGGGCGCGAC CTCAACCCGCTGTTGCAGGACCCGGGTCTCATCTTCCACCCGCCCATGCTCTACATGGGCTATGTGGGCTTCTCGGTGGC CTTCGCCTTCGCCATCGCGTCCTTGATGACCGGTCGGCTCGATGCCACCTGGGCGCGCTGGTCGCGTCCCTGGACCATGG CGGCCTGGGTCTTCCTCACCCTGGGTATCGTGCTGGGCTCCTGGTGGGCCTATTACGAGCTCGGCTGGGGTGGCTGGTGG TTCTGGGATCCGGTAGAAAACGCCTCCTTCATGCCCTGGCTGGCGGGCACCGCCCTGCTGCACTCGCTGGCGGTCAGTGA AAAGCGCGCCACCTTCAAGGCCTGGACCGTGCTGCTGGCGCTCTCCGCCTTCTCCCTGAGCCTGCTGGGTACCTTCCTGG TGCGCTCCGGCGTGCTGGTGTCGGTGCATGCGTTTGCCTCCGACCCGACCCGCGGCCTGTTCATTCTGGGCTTCCTGCTG GCGGTAATCGGTTCATCCTTGCTGCTGTTTGCCTTCAAGGGCTCCCAGGTGAGAAGCCACGGCAAGCACGAGTTGTGGAG CCGCGAGACCCTGCTGCTGTGCAACAACATCATGCTGGTGGCGGGTCTGCTGACCGTGCTGCTCGGCACCCTGCTGCCGC TGGTACACAAGGAGTTGGGGCTGGGCAGCATCTCCATCGGTACTCCCTTCTTCAACCACATCTACAGCTGGCTGATCATT CCGTTCGCCCTGTTGCTGGGGGTCGGCCCGCTGTTTCGCTGGCGCCGCCAGGAGCTGGGCGAGCTCAAGGGCAAGGTGGT GCTGGCGCTGGTATTGAGCCTGGCCGCCGCCATTTTGCTGCCGCTGCTGCTGGCTGAGGAGTTCAAGCCCTGGGCTGCGC TCGGTATCGGGCTTGGCGCCTGGATCATCGTGACCAGCGTGCAGGAGACCTGGGTGCGTGCCACCCACAAGCACAGCTTC GCCGTCGGCGTGCGCCGCCTTGGCAACAGCCACTGGGCCATGATCCTGGGCCACGTGGGCCTCGCGGTCAGCATCATCGG CATCGCCTGTACCCAGAACTACAGCATCGAGAAGGATCTGCGGATGCAGGCCGGCGATCGGGTCCAGTTTGCCGACTACG AGTTTGTCTTCACCGGCATCAAGGAGAAGAACGGCCCCAACTACGACGGCTTCAAGGGCGTGCTGGAAGTGCACAAGGAC GGCAAGCAGGTCGCCCTGCTCAAGCCGGAGAAACGCATGTACAAGGTGACCCGGATGCCGATGACCGAGGCGGCCATCGA TGCCGGCTTCACCCGGGATCTCTACGCGGCGCTCGGCGAGCAGCTCGACAGCGGCGCTTGGGCGGTGCGGATCTACTACA AACCCTTCGTGCGCTGGATCTGGTTCGGCGGCGTCTTCATGGCCATTGGCGGCGTGCTGGCGATGCTGGACAAGCGCTAC CGTTTCGGTCGCCGTGACGAGGAGGCCAAGGCATGA Protein sequence : MIPELGQFSLILAFATALLLGSYPLLGAKWGRLGMMSAARPLAYAQFLLLLLSFLCLTWAFIDNDFTVQYVATNSNSLLP LAYRISAVWGAHEGSLLLWVLTLGGWTAAVAMFSRRLPLDAVARVLGVLGLISVGFTAFVLFTSDPFIRTLPYFPVDGRD LNPLLQDPGLIFHPPMLYMGYVGFSVAFAFAIASLMTGRLDATWARWSRPWTMAAWVFLTLGIVLGSWWAYYELGWGGWW FWDPVENASFMPWLAGTALLHSLAVSEKRATFKAWTVLLALSAFSLSLLGTFLVRSGVLVSVHAFASDPTRGLFILGFLL AVIGSSLLLFAFKGSQVRSHGKHELWSRETLLLCNNIMLVAGLLTVLLGTLLPLVHKELGLGSISIGTPFFNHIYSWLII PFALLLGVGPLFRWRRQELGELKGKVVLALVLSLAAAILLPLLLAEEFKPWAALGIGLGAWIIVTSVQETWVRATHKHSF AVGVRRLGNSHWAMILGHVGLAVSIIGIACTQNYSIEKDLRMQAGDRVQFADYEFVFTGIKEKNGPNYDGFKGVLEVHKD GKQVALLKPEKRMYKVTRMPMTEAAIDAGFTRDLYAALGEQLDSGAWAVRIYYKPFVRWIWFGGVFMAIGGVLAMLDKRY RFGRRDEEAKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-147 | 62 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-124 | 54 |
