Gene Information

Name : rnhA (AHA_1568)
Accession : YP_856105.1
Strain : Aeromonas hydrophila ATCC 7966
Genome accession: NC_008570
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 1715821 - 1716285 bp
Length : 465 bp
Strand : -
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
ATGCTAAAAAAGATCGATTTGTATACGGATGGTTCCTGTCTCGGCAACCCGGGCCCTGGCGGCTATGGTGCCGTCATGGT
CTATGGCAAGCACCGCAAGGAGCTCGCCGGCGGTTTTCGCCTCACCACCAACAACCGGATGGAGCTGATGGCCGCCATCA
TGGGGCTGCGCACCCTGAACGAGCCCTGCCAGGTCAGACTCACCACCGACAGCCAGTATGTGCGCCAGGGGATCACCCAG
TGGATCATCGGCTGGAAGAAGAAAGGATGGGTGACAGCCAGCCGTCAGCCGGTCAAGAACGTCGATCTCTGGCAGGCATT
GGATGCGGAAGTGGCGCGCCATCAGATCGAATGGCTCTGGGTCAAGGGGCACTCCGGTCACCCGGAAAACGAACGCTGTG
ACGAGCTGGCCCGCGAGGCCGCCAGCGGCAAGCAGCTGGCCGAGGACACAGGTTACCAGCCCTGA

Protein sequence :
MLKKIDLYTDGSCLGNPGPGGYGAVMVYGKHRKELAGGFRLTTNNRMELMAAIMGLRTLNEPCQVRLTTDSQYVRQGITQ
WIIGWKKKGWVTASRQPVKNVDLWQALDAEVARHQIEWLWVKGHSGHPENERCDELAREAASGKQLAEDTGYQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 5e-46 66