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Name : secD-1 (AHA_1737) Accession : YP_856273.1 Strain : Aeromonas hydrophila ATCC 7966 Genome accession: NC_008570 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1901088 - 1902941 bp Length : 1854 bp Strand : + Note : identified by similarity to SP:P19673; match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR01129 DNA sequence : GTGTTAAATCGCTATCCGCTGTGGAAATACCTGATGGTGGTCGTGGTGATCGCCATCGGTTTTCTATATGCAGCCCCCAA TCTTTACGGCGAAGACCCGGCCTTGCAGATCTCTGCCAGCCGGGGGGCCGAAGTCAAGCTGGACACCCTTGACCTGGTGA AAGAGACGCTCGATGCGGCTCAGATCCCGGTCAAGCATGCGGCGTTCGAGCACGGCTTCATCCTGGTTCGTTTCAAAAAT ACCGAAGAGCAGCTCAAGGCGCGCGACATCGTCGCCAACAAGCTGGGCGACAACTTCATTACCGCTCTCAACCTGGCCCC TTCCACGCCTGCCTGGCTCGAAGCCATCGGCGCCAACCCGCTCAAGCTGGGTCTGGACCTGCGCGGCGGTGTGCACTTCC TGATGGAAGTGGACATGGCCGAGGCGCTGACGAAGCAGCAAGAGCAGATGGTGCAGGATTTCCGCTCCGAGCTGCGTACC CAGAAGATCCGTTATTCCGGTGTGCGCCGGGCCGGTGATCAGGTACAGGTGCTGTTCCGTGACGAGGCCGATCAGGCCAA GGCCATCTCTCACCTGCGTCGTCAGAACCCGGATCTCACCTTCACCACCGAGCAGAAGGGGGACGAGTTCGTCCTGCTGG CCGGTCTGAGTGAAGCCAAGATCAAGGAAGTTAAGAAGTACGCCCTCGAGCAGAACATCACCATCATCCGCAACCGGGTG AACGAGCTGGGCGTGGCCGAGCCGCTGGTACAACAGCAGGGTGCCGAGCGCATCGTGGTGGAACTGCCCGGCATTCAGGA CACCGCCCGTGCCAAGGAGATCCTCGGCGCGACCGCGACCCTGGAATTCCACATGGTCGATGAGACCGCCGACATCCAGG CTGCGGCCGATGGTCGGGTGCCGCCGAGCTCCAAGGTCTACAACGATCGCAACGGACGTCCGGTTGTGCTGCAAAAGCGC ATCATCCTGACCGGTGACCACATCGTGGGTGCCCAGTCCGGTTTCGATGAATACAGCCGTCCCCAGGTCAACATCAAGCT TGATGGCCAGGGTGGCAACAAGATGGCCAACTTTACCAAGGACAACGTTGGTAAGGGCATGGCGACCGTGTTCATCGAAT ACAAACCGGTCGGTCAGCCGGGTCCGGATGGCAAGCGCAAGTTCCGCAAGCAGGAGGAGGTGATCAACGTCGCCACCATC CAGTCGCGCCTTGGCAGCCAGTTCCGCATCACCGGCATCGACAACGCCAACGAAGCCCACAACCTGGCGCTGCTGCTGCG TGCCGGTGCGCTGATCGCCCCGATCCAGATCGTGGAAGAGCGCACCATAGGCCCGAGCCTGGGTCAGCAGAACATCGACA GCGGTATGGAAGCCATCGGCTGGGCCATGCTGGTGATCGTGCTGTTCATGGGGATCTACTACCGTGCGTTCGGCTGGGTG GCCAACATCGCCCTCACCATGAACCTGGTGCTGATCGTCGGTATCATGTCGATGATCCCGGGGGCCACCATGACCCTGCC GGGTATTGCCGGTATCGTCTTGACGCTGGGCATGGCGGTGGATGCCAACGTGCTGATCTACGAGCGTATTCGTGAAGAGA TCCGCAACGGTCGTGGGGTGCAGCAGGCCATCCATCTGGGCTTTGATCGGGCGTTCTCGACCATCGCCGACTCCAACGTC ACCTCGCTCATCACCTGTGTGATCCTGTTCGGTATCGGTACCGGCGCCATCAAGGGCTTCGCCCTGACGCTGGGGATTGG TCTGAGTGCTTCCATGTTTACCGCCATCACGGTCTCCCGCGCCATCATCAACCTGGCCTGGGGTGGACGGCGCCTCGACA AGCTGCCGATCTAA Protein sequence : MLNRYPLWKYLMVVVVIAIGFLYAAPNLYGEDPALQISASRGAEVKLDTLDLVKETLDAAQIPVKHAAFEHGFILVRFKN TEEQLKARDIVANKLGDNFITALNLAPSTPAWLEAIGANPLKLGLDLRGGVHFLMEVDMAEALTKQQEQMVQDFRSELRT QKIRYSGVRRAGDQVQVLFRDEADQAKAISHLRRQNPDLTFTTEQKGDEFVLLAGLSEAKIKEVKKYALEQNITIIRNRV NELGVAEPLVQQQGAERIVVELPGIQDTARAKEILGATATLEFHMVDETADIQAAADGRVPPSSKVYNDRNGRPVVLQKR IILTGDHIVGAQSGFDEYSRPQVNIKLDGQGGNKMANFTKDNVGKGMATVFIEYKPVGQPGPDGKRKFRKQEEVINVATI QSRLGSQFRITGIDNANEAHNLALLLRAGALIAPIQIVEERTIGPSLGQQNIDSGMEAIGWAMLVIVLFMGIYYRAFGWV ANIALTMNLVLIVGIMSMIPGATMTLPGIAGIVLTLGMAVDANVLIYERIREEIRNGRGVQQAIHLGFDRAFSTIADSNV TSLITCVILFGIGTGAIKGFALTLGIGLSASMFTAITVSRAIINLAWGGRRLDKLPI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 6e-129 | 49 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-129 | 49 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-129 | 49 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-129 | 49 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-129 | 49 |
