Gene Information

Name : AHA_1839 (AHA_1839)
Accession : YP_856373.1
Strain : Aeromonas hydrophila ATCC 7966
Genome accession: NC_008570
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3522
EC number : -
Position : 2005719 - 2007053 bp
Length : 1335 bp
Strand : +
Note : identified by match to protein family HMM PF05936

DNA sequence :
ATGTCGAGTCGAAATCGGGTTATCTGGCGTGAGGGGCTCTTCATCAAGCCCCAGCACTTCCAGCAACAACAAAGACATTC
GGATTACGCGCTGCACGCTCGCCTGAGCGCGCTGTCCGATTATTTCTATGGCTTGCAGTCGCTCGCCATCAACGAGGATT
ACCTGGGTTTTGGTCGCATCGCCCTGGTGGGGGCCACCGGCATCCTGCCGGACGGTACCGTGTTCAACATCCCCAATGAC
GACGTGCTGCCGACCCCGCTGGAGGTCACCGACGCCTCGGTGGCCAACCAGAAGGTCTATCTGGCCCTGCCGCTCTCGGT
GAGCGGCGTCAATGAGGTGGGGCAGGGCGGTCAGGTGGCTACCCGGTTGCAGGCCCATCGCCACGACGTGCGCGATCTGC
ACAGCGAAGGGGGGGACGTGGTTTCCCTCGAAGTGGGGCGGGTCAGCCTGCGGCTGATGCTGGAGCGCGAGGATCGCAGC
GCCTATGCGTCGCTCGCCATCGCCCGCATTCTGGACAAGCGTCCGGACGGCGGCCTGGTGCTGGATCCCAACTTCATGCC
CTGCAGCATCAGCGTCTCCGCCATCCCGACCCTCAAGCGCTTCCTCGGTGAGTCGGCCGGGTTGGTCGCCGAGCGGGCTC
GTAGCCTCTCCCAGCGCATCGCCGCGCCGGGTCAGCAGGGGGTGGCCGATGTGGCCGAGTTCATGATGCTGCAGCTGCTC
AACCGGGCCCAGCCCCAGCTTTCCCATCTGGCGCGCCTTGGCACCCTGCACCCCGAGCGGCTGCACGAGGCGCTGGTGCA
GCTCTGCGGCGAGCTGATGACCTTTACCGACGAGTCCCGCCTGCCGCCCGAGTTCTCTGCTTACCGTCACGACGATCAGC
AGGTGAGCTTCGAGCCGGTGATGCTGGCCCTGCGCCAGGCGCTCAGCACCGTGCTGTCGCCGCGCGCCGTCTCCATCCAG
CTGCGCAAGCACCAGTACGGCATTATGGTGGCCATGGTCAACGAGAGCGAGCTGATGCAGAGCGCCGACTTCGTATTGGC
GGTGCGTGCCCGCATGCCGCAGGAGCAGCTGCGCAAGCAGTTGCTGCAGCAGACCAAGGTGGCCTCCAGCGACAAGATCC
GCGAGCTCATCAGCCTGCAGCTGCCCGGCATTCCGCTGCTGCCGCTGCCGGTGGCGCCGCGGCAGCTGCCCTATCACGCC
GGTTACAGCTACTTCCAGCTCGACCGGCAGAGCCCGGCCTGGCAGATGCTGGCGGTGGGCAACACCCTTGCCTTCCACAT
CGCCGGCGACTTCCCCGAGCTCGACATGCAGCTCTGGGCCATTCGCAGCCAGTGA

Protein sequence :
MSSRNRVIWREGLFIKPQHFQQQQRHSDYALHARLSALSDYFYGLQSLAINEDYLGFGRIALVGATGILPDGTVFNIPND
DVLPTPLEVTDASVANQKVYLALPLSVSGVNEVGQGGQVATRLQAHRHDVRDLHSEGGDVVSLEVGRVSLRLMLEREDRS
AYASLAIARILDKRPDGGLVLDPNFMPCSISVSAIPTLKRFLGESAGLVAERARSLSQRIAAPGQQGVADVAEFMMLQLL
NRAQPQLSHLARLGTLHPERLHEALVQLCGELMTFTDESRLPPEFSAYRHDDQQVSFEPVMLALRQALSTVLSPRAVSIQ
LRKHQYGIMVAMVNESELMQSADFVLAVRARMPQEQLRKQLLQQTKVASSDKIRELISLQLPGIPLLPLPVAPRQLPYHA
GYSYFQLDRQSPAWQMLAVGNTLAFHIAGDFPELDMQLWAIRSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec25 YP_851420.1 hypothetical protein Not tested PAI II APEC-O1 Protein 9e-94 48
aec25 AAQ96719.1 Aec25 Not tested AGI-1 Protein 7e-94 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AHA_1839 YP_856373.1 hypothetical protein VFG2082 Protein 2e-132 60
AHA_1839 YP_856373.1 hypothetical protein VFG2065 Protein 4e-90 44