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Name : AHA_1842 (AHA_1842) Accession : YP_856376.1 Strain : Aeromonas hydrophila ATCC 7966 Genome accession: NC_008570 Putative virulence/resistance : Virulence Product : sigma-54 dependent transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 2010521 - 2012059 bp Length : 1539 bp Strand : + Note : identified by match to protein family HMM PF00158; match to protein family HMM PF02954 DNA sequence : ATGGAGCAAGCCCTCGCATTTTCCCTGGCCCTCACCGCCCAGCGCGATGAGCCACACCTGTGCCACTGGTGGAGCTCGAC CGTCCATGCCAGCTTCCAGCCCAGGGGGCTGCTGCTCGGCATGCTGGATGTGAGCGGCCGCCAGCTGGAGTGCCAAGGCT GGGTCAGGGGGAAGGAGGTGGCGCTGGGGCTGGCGGTGGACGATTTTTCCCACCCCCTTGCCTATGTGCTGCACAAGGCC CAGTCCCGTACCTGGGACTCCCTCTACGGCGGTGCCCGCATCGAGCACGCCGGTTTTCGCGCACTGCTGGCCAACCTTGG CCAGCAGTGCGGGCTGCACGCGTATCCGCTGCTGGATGGCAACGGCAAGCCGTTTGCCGTGCTGGCCCTGATGGATGAAG GGGAGGTGCTGCGGGCCTGGGCCGACGGCCCCGAGCTGGCCCAGCTCTCCCAGGTCTTTTGCAACCAGCTCACCCTCATT CGCGATCTCGGTCGCAGTCGGCGGGATCAGGGGGTACTGCGCGACTCCCTGCGCCAGATGAAGGGGGAGGGGGAGCGGCT GCGCCAGCACGAGAAGCTGCTCGGCGATCAGCTGGTCGGCCAGTCGGCGGTGATCCGCGGGCTGCGCGAGCAGATCAACC AGGCCGGCCAGCACAAGCTGACCGTGCTGATCCAGGGGGAGACCGGCAGCGGCAAGGAGGTGGTGGCACGGCTGGTGCAC CAGTGCTCCGATCGCGCCAACAAGCCGTTTGTCGCCATCAACTGCGCCGCCATCCCGGAGAACCTCATCGAGAGCGAGCT GTTTGGTTACCAGAAGGGAGCCTTCTCCGGCGCCCTTGCCAACAAGACCGGGCTGGTGGCCCAGGCCAACGGTGGCACCC TGTTTCTGGACGAGGTGGGGGACATGCCCGCTGCCATGCAGGCCAAGCTGCTGCGGGTGCTGGAAACCCGCAGTTACCGG CCGCTCGGGGCCGAGCAGGAGTATCACTCCGATTTTCGCCTCATCGCCGCTACCCATCAGCCGCTCACCCGACATGTGGA GGAGGGGCAGTTTAGGGCCGACCTCTACCACCGTCTCTGTCAGTGCCTGCTGCTGATTGCCCCCCTGCGCGAACACATGG ATGACGTGCCGCTGTTGTGCCAGCACTTCATGGCCCAGTTTGCTGCCCAAGATGGCAAGACCTTGGTGGGGCTGCAGCGC AAGTTCTTGAAACAGCTGCAGACCTATGACTTCCCCGGCAACGTGCGCGAGCTGCGCAACCTGCTGGAGGTGGCCTGCGC CCATACCCGTCACGGGGAGGAGGTGGGGCTGGAGGCGCTGCCGCCGGAGCTGCGCGAGCGGGTCAGCGCCCTGCTGCCCT CTTCCATGGACGACTACAACCACATCCGCGATCTGCGCCGGGCCATGCAGCAGTATGAGGCTTCCGTCATCGAGGCGCGG CTGCGCCACTTCCAGGGCAATCGGATGCTGGTGGCCGAGAGCCTCAACATTCCCAAGCGCACCCTGGATCACAAGTGCCA GAAACTGGAGGTGAACTGA Protein sequence : MEQALAFSLALTAQRDEPHLCHWWSSTVHASFQPRGLLLGMLDVSGRQLECQGWVRGKEVALGLAVDDFSHPLAYVLHKA QSRTWDSLYGGARIEHAGFRALLANLGQQCGLHAYPLLDGNGKPFAVLALMDEGEVLRAWADGPELAQLSQVFCNQLTLI RDLGRSRRDQGVLRDSLRQMKGEGERLRQHEKLLGDQLVGQSAVIRGLREQINQAGQHKLTVLIQGETGSGKEVVARLVH QCSDRANKPFVAINCAAIPENLIESELFGYQKGAFSGALANKTGLVAQANGGTLFLDEVGDMPAAMQAKLLRVLETRSYR PLGAEQEYHSDFRLIAATHQPLTRHVEEGQFRADLYHRLCQCLLLIAPLREHMDDVPLLCQHFMAQFAAQDGKTLVGLQR KFLKQLQTYDFPGNVRELRNLLEVACAHTRHGEEVGLEALPPELRERVSALLPSSMDDYNHIRDLRRAMQQYEASVIEAR LRHFQGNRMLVAESLNIPKRTLDHKCQKLEVN |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| AHA_1842 | YP_856376.1 | sigma-54 dependent transcriptional regulator | VFG2085 | Protein | 2e-78 | 42 |
