Gene Information

Name : Mmc1_3211 (Mmc1_3211)
Accession : YP_867107.1
Strain : Magnetococcus marinus MC-1
Genome accession: NC_008576
Putative virulence/resistance : Unknown
Product : protein translocase subunit secF
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG0341
EC number : -
Position : 3993762 - 3994697 bp
Length : 936 bp
Strand : -
Note : TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: tcx:Tcr_1330 SecF protein

DNA sequence :
ATGCAGGTCTTTTTAAAAGCGACTCACTTTGACTTTATTGGTCGACGTAAACCGGCAATCTATGCCTCGCTGTTTCTTAT
TGGGGTAAGTCTGGTTTCACTCTTCACCCAAGGTTTGAATTTTGGTATTGATTTCGCCGGGGGTACCTTAATCCAGGTAC
GCTTTGAAAAGCCCATGGATCTGGCACCGGTTCGGCAGGCTATCGCCCCTCTGGATCTGGGGGATACAGTGGTGCAATCC
TTTGGTACCCCAGAAGAGGTGTTGATTCGGGTAGAAAAGCAGGGTGCGGATAATGCCGCCCAGCAGGCCATCGTCAGCGG
TGTGCTGGATGCCCTCAAACCCATCGCGGGTGAGCATGGCGTGGAGATGCGCCGGGTGGAGTATGTGGGGCCGCAGGTGG
GGGAAGAGCTGACAGAAAAGGGGATGCTGGCGATGCTCTACGCCATGGTCGCCATTCTGATCTACATCTCTTTTCGCTTT
GAGCTCCGCTTTGCCCTGGGTGCGGTGTTGGCGTTGGTGCACGATGTGGTGTTGACCATGGGCTTTTTCTCGGTATTGCA
GAAAGAGTTTACCTTGGTGGTGGTCGCCGCTTTGTTGACCGTGGTGGGTTACTCCCTCAACGATACCATTGTGGTCTATG
ACCGCATTCGCGAAGAGATGAAGCGCATGAAGCGCCAACCGCTAGCAACCATCATCAATGAGGCGGTCAACCGCACCCTT
TCACGGACGTTGATTACTTCTCTAACCACCGTGTTGGTGTTGATTGCCCTGTTTGTGCTGGGTGGGGCGGTGATCCATGA
TTTTGCTTTGACCCTGCTGTTTGGTGTGGGTATCGGTACCTACTCCTCCATCTTTGTGGCCAGTCCGCTGGTTTTGCTAA
TGGACCCTGGCAGCCGACGCAAAGTGGCGGCTGAAACGGCGGAAGAGACCCCATAA

Protein sequence :
MQVFLKATHFDFIGRRKPAIYASLFLIGVSLVSLFTQGLNFGIDFAGGTLIQVRFEKPMDLAPVRQAIAPLDLGDTVVQS
FGTPEEVLIRVEKQGADNAAQQAIVSGVLDALKPIAGEHGVEMRRVEYVGPQVGEELTEKGMLAMLYAMVAILIYISFRF
ELRFALGAVLALVHDVVLTMGFFSVLQKEFTLVVVAALLTVVGYSLNDTIVVYDRIREEMKRMKRQPLATIINEAVNRTL
SRTLITSLTTVLVLIALFVLGGAVIHDFALTLLFGVGIGTYSSIFVASPLVLLMDPGSRRKVAAETAEETP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secF AAT96102.1 SecF Not tested T-PAI Protein 1e-50 42
secF AAT96066.1 SecF Not tested T-PAI Protein 4e-51 42