Gene Information

Name : Shewana3_0227 (Shewana3_0227)
Accession : YP_867877.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmE
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2332
EC number : -
Position : 258101 - 258586 bp
Length : 486 bp
Strand : -
Note : CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocyt

DNA sequence :
GTGAACCCAAGACGCAAAAAGAGACTGACGTTAGCTGTAGCATTAATCGGTGGCGTAGCCGCGATTGCTTCGCTTCTGCT
GTATGCGCTGAACTCCAACTTAAACTTATTCTATACACCGTCGGAGATCGTACACGGTAAAACCGATACCGGTGTTAAAC
CCGAAGCGGGCCAACGTATTCGCGTAGGCGGTATGGTAACGGTTGGTTCTATGGTGCGCGATCCAAACAGCCTGCACGTG
CAATTTGCCGTGCATGACTCATTAGGTGGCGAAATTCTCGTGACCTATGACGATCTGCTGCCGGATCTGTTCCGCGAAGG
CCAAGGTATTGTGGCACAAGGTGTATTAGGTGAAGACGGCAAATTGGCCGCAACCGAAGTACTGGCTAAGCATGACGAAA
ACTACATGCCGCCAGAAGTGGCCGAAGCCATGGGCCAAAAACATGAAAAGTTAGATTACAGCCAGCAAAAATCGGCGGCG
CAATAA

Protein sequence :
MNPRRKKRLTLAVALIGGVAAIASLLLYALNSNLNLFYTPSEIVHGKTDTGVKPEAGQRIRVGGMVTVGSMVRDPNSLHV
QFAVHDSLGGEILVTYDDLLPDLFREGQGIVAQGVLGEDGKLAATEVLAKHDENYMPPEVAEAMGQKHEKLDYSQQKSAA
Q

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmE YP_217242.1 cytochrome c-type biogenesis protein CcmE Not tested SPI-12 Protein 2e-27 57
cycJ / ccmE AAN62107.1 putative cytochrome C-type biogenesis protein CycJ Not tested PAGI-2(C) Protein 1e-18 47