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Name : Shewana3_0234 (Shewana3_0234) Accession : YP_867884.1 Strain : Shewanella sp. ANA-3 Genome accession: NC_008577 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 263235 - 265214 bp Length : 1980 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: son:SO0266 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATCCCAGAACTTGGACACTTTTCGCTGATTATAGGAGTGGCATTCGCCTTCTTATTAGTCAGCGTTCCCCTTATAGG TGTTGCCCGTAAAGACCAATATCTAGTGAGGTATGCTTGGCCGTTAACCTACGGAATGTTCTTTTTTATCGCTTTATCCG TAGTATCTCTTGGTTACAGCTTCGCCGTTGATGACTTCTCCGTTGCCTATGTGGCACATCACTCGAACTCCCAGTTACCT ATCTTCTTTAAGATTGCGGCCGTATGGGGCGGTCATGAAGGGTCACTGCTGTTCTGGGTGTTTGCGCTATCGACCTGGGC GGCTTCGGTTGCCTTATTCAGTAAAGGCTTAGAAGAAGTGTTCACCGCTAGGGTTTTAGCTGTACTGGCGCTGATCGTGA TTGGCTTTAGCTTATTTATGCTACTCACCTCTAGCCCATTTGAACGCCTATTCCCAATGCCAGCCGAAGGTCGTGACTTA AACCCAATGCTGCAGGACGTGGGCTTAATCTTCCATCCACCTATGCTGTACTTAGGTTATGTGGGCTTCTCGGTAAGCTT CGCGTTTGCGATTGCAGCTCTGATGAGTGGTCACCTTGACTCTGCATGGGCACGTTGGTCACGTCCTTGGACTTTAGCCG CTTGGATTTTCCTCACAGGCGGTATTGCATTAGGTTCTTGGTGGGCATACTACGAATTAGGCTGGGGTGGCTGGTGGTTC TGGGATCCCGTAGAAAACGCTTCCTTTATGCCTTGGTTAGTCGGTACAGCATTAGTGCATTCACTGATCGTGACCGAAAA ACGTGGTGCGTTCCGTAACTGGACCGTATTACTGTCTATCTTCGCGTTCTCTTTAAGCTTACTCGGTACCTTTATCGTGC GTTCGGGTGTATTGACCTCAGTACACTCCTTCGCAGCCGATCCAAGCCGCGGTATGTTCATTCTGTTACTGCTGGGTCTT GCGATTGGTGGTTCACTCACGCTGTTCGCCTTCCGCGCCAGTGAAATGAGCAGCCCTGCACGTTTCGAGCTGAAATCAAA AGAAACCATGCTGTTAGTCTGTAACGTGTTACTCACGGTTGCAGCGGGTACTGTGTTGTTAGGAACTCTATATCCACTGC TGATCGATGCCTTAGGCATGGGTAAGATTTCTGTTGGACCTCCATACTTCAATGCTGTGTTTGTGCCTATCGTCCTCGTA CTGTTTGGCTTTATGGGTGTCGGTCCAATCATCCGCTGGAAGAAATCCAAAGCCGGTGAGCTCAAACGTCAATTACTGGT GCCTGCATTAGTCTCTGCAGCGATTGGTATCGTGACACCGTTTATTGTGGATGGTGCGTTCAACGCTTGGGTTGCCTGTG GTATCGCCGCTGCGTCTTGGATTGTGTTAGCGACGGCAAGAGCCGCGTATAACATCGTTAAGCCAAAAGAAGGCGAAGTG AGCGTGGCACGTATGGGCCGCAGCGAACTAGGGATGATCTTAGCCCACTTAGGTATTGCCGTGTCGGTGATTGGTGCCAC TATGGTATCGAACTACTCGGTTGAGAAGAGTGTGCGTATGGGCCCAGGCGTGAGCCAAGAGCTTGCGGGCTATACCTTTA AGTATCTCGAGACTAAGAACGTCGTAGGTCCTAACTACACCGCGCAACAAGGTCAAATTGAGATCTACAAAGGCGATAAA CTGCTGACGTTGCTCAAGCCTGATCGTCGCCAATACAATGTGCGTACTATGGACATGACCGAAGCGGGTATCGATTGGGG TCTGTTCCGTGACTTATATGTCACCATGGGCGACCCAATCAGCAGCACTGAGTTTGCTGTGCGTTTGAACTACAAGCCAT TTGTTCGTTGGTTATGGTTTGGAGCAATATTCATGATGGTTGGTGGTTTCTTCGCCGCATCGGATAAACGCTATCGCTCA AAAGTGGCGGCTACGGTTAAGCCACAAGCTGAAAAAGCGAAATTAGCTACCGCGCAATAG Protein sequence : MIPELGHFSLIIGVAFAFLLVSVPLIGVARKDQYLVRYAWPLTYGMFFFIALSVVSLGYSFAVDDFSVAYVAHHSNSQLP IFFKIAAVWGGHEGSLLFWVFALSTWAASVALFSKGLEEVFTARVLAVLALIVIGFSLFMLLTSSPFERLFPMPAEGRDL NPMLQDVGLIFHPPMLYLGYVGFSVSFAFAIAALMSGHLDSAWARWSRPWTLAAWIFLTGGIALGSWWAYYELGWGGWWF WDPVENASFMPWLVGTALVHSLIVTEKRGAFRNWTVLLSIFAFSLSLLGTFIVRSGVLTSVHSFAADPSRGMFILLLLGL AIGGSLTLFAFRASEMSSPARFELKSKETMLLVCNVLLTVAAGTVLLGTLYPLLIDALGMGKISVGPPYFNAVFVPIVLV LFGFMGVGPIIRWKKSKAGELKRQLLVPALVSAAIGIVTPFIVDGAFNAWVACGIAAASWIVLATARAAYNIVKPKEGEV SVARMGRSELGMILAHLGIAVSVIGATMVSNYSVEKSVRMGPGVSQELAGYTFKYLETKNVVGPNYTAQQGQIEIYKGDK LLTLLKPDRRQYNVRTMDMTEAGIDWGLFRDLYVTMGDPISSTEFAVRLNYKPFVRWLWFGAIFMMVGGFFAASDKRYRS KVAATVKPQAEKAKLATAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-145 | 54 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 4e-121 | 50 |
