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Name : MSMEG_2044 (MSMEG_2044) Accession : YP_886405.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : integral membrane transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 2121822 - 2123135 bp Length : 1314 bp Strand : + Note : identified by match to protein family HMM PF00083; match to protein family HMM PF07690 DNA sequence : GTGACTCTTGCTGACCAACGCGCCGCGTCCGCTTCCAAACCGAGTGCGCGTACCGTCGCGCTGGGTAGCGCGGTCGGAAC CACGATCGAGTGGTACGACTTCTACCTGTACGCCACGGCCGCGGCGCTCGTCTTCAAACCCCTGTTCTTCCCGAACGTCT CGTCGACGGCCGGCACGTTGGCCGCGTTCGCGACCTACGCCGCGGGATTCGGCGCCCGGCCGCTGGGCGCGCTGATATCC GGCCACTACGGCGATCGGGTGGGACGCAAGACCGTCCTGGTCGCCGCGCTGCTCGGCATGGGCATCAGCACCTTCCTGAT CGGCCTGTTGCCCACCTACGCACAGGTGGGTCTCCTGGCCCCGGCATTGCTGGTGACCCTGCGACTGCTGCAGGGCCTCG CCGTCGGCGCGGAATGGGGCGGCGCGGCGCTGCTGTCGGTCGAACACGCCCCGCCGGGCCGTCGCGGGTTGTTCGGCAGC TTCACCCAGCTGGGCTCACCCGCGGGCATGTTGCTGTCGACGGGCGTTTTCTCCGTGACCAGGGCGGTCTGCGGACCTGA GGCTTTCCTCGCGTACGGCTGGCGAATCCCGTTCCTGCTCAGCGCCGTTCTGGTCGTGATCGGTCTGGTGATCCGCCTGC GGCTCACCGACGCCGACGTTTTCCTCCGGGTCAAGGAAGCCGGCGAGGTCGCCCGCATGCCCGTGTTGGAGGTGCTGCGC ACCCAGCCGCGCGGCGTCGTGATCACCACCGGCCTGCGGATCTCGCAGATCGCGCTGTTCGTCCTGCTCACGACGTATTC GCTGACCTATCTGCAGGATCAGACATCCGCCGGTGGCGGGGTCGGCCTGACCGCGGTGCTCATCGCGTCGGCGATCGGCC TGATCACCACCCCGCTCTGGGGCATCGTGTCCGACCGCATCGGCCGGCGCCCGCCCTATCTGTTCGGCGCGATCGCCGGC GTCGTGGCGCTCGTCCTGTTCTTCCTCGCGGCCGATTCCGGCTCGTCGGTCCTGATCATCCTGGCGATCGTGTTCGGCGT GAACATCGCGCACGACGCCATGTACGGCCCGCAGGCCGCCTGGTTCGGTGAGCTGTTCGACACCCGCGTGCGTTACAGCG GCGCGTCATTGGGATACTCGATCGGCGCCGTGCTCTCCGGCGGGTTCGCGCCGCTCATCGCGGCGTCCCTGTTGGCCGCC GGTGACGGCAGCCCGTGGCTGATCGTCGGGTACTTCGTGGTGCTCACCGTGATCACCGTCGCGGCCGCCTATTTCGCGCG CGAGACACACAAGGACGAGATCGGGGACGAGTGA Protein sequence : MTLADQRAASASKPSARTVALGSAVGTTIEWYDFYLYATAAALVFKPLFFPNVSSTAGTLAAFATYAAGFGARPLGALIS GHYGDRVGRKTVLVAALLGMGISTFLIGLLPTYAQVGLLAPALLVTLRLLQGLAVGAEWGGAALLSVEHAPPGRRGLFGS FTQLGSPAGMLLSTGVFSVTRAVCGPEAFLAYGWRIPFLLSAVLVVIGLVIRLRLTDADVFLRVKEAGEVARMPVLEVLR TQPRGVVITTGLRISQIALFVLLTTYSLTYLQDQTSAGGGVGLTAVLIASAIGLITTPLWGIVSDRIGRRPPYLFGAIAG VVALVLFFLAADSGSSVLIILAIVFGVNIAHDAMYGPQAAWFGELFDTRVRYSGASLGYSIGAVLSGGFAPLIAASLLAA GDGSPWLIVGYFVVLTVITVAAAYFARETHKDEIGDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 2e-54 | 41 |
