Gene Information

Name : MSMEG_0272 (MSMEG_0272)
Accession : YP_884687.1
Strain : Mycobacterium smegmatis MC2 155
Genome accession: NC_008596
Putative virulence/resistance : Virulence
Product : propanediol utilization protein PduA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 305803 - 306084 bp
Length : 282 bp
Strand : -
Note : identified by match to protein family HMM PF00936

DNA sequence : 
ATGTCCAGCAACGCAATCGGATTGATCGAGACCAAGGGTTACGTGGCCGCCCTGGCCGCTGCCGACGCCATGGTCAAGGC
CGCCAACGTCACCATCACCGACCGCCAGCAGGTGGGCGACGGACTCGTCGCGGTGATCGTCACGGGTGAGGTCGGCGCGG
TCAAGGCCGCGACCGAGGCCGGCGCCGAAACCGCCTCGCAGGTCGGCGAACTCGTCAGCGTGCATGTCATCCCGCGTCCG
CACAGCGAACTGGGCGCGCACTTCTCGGTGTCCAGCAAGTAG

Protein sequence : 
MSSNAIGLIETKGYVAALAAADAMVKAANVTITDRQQVGDGLVAVIVTGEVGAVKAATEAGAETASQVGELVSVHVIPRP
HSELGAHFSVSSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-10 55
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-10 54
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 8e-11 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSMEG_0272 YP_884687.1 propanediol utilization protein PduA VFG1596 Protein 2e-10 55
MSMEG_0272 YP_884687.1 propanediol utilization protein PduA VFG1598 Protein 6e-11 54
MSMEG_0272 YP_884687.1 propanediol utilization protein PduA VFG1597 Protein 3e-11 50