|
Name : MSMEG_0301 (MSMEG_0301) Accession : YP_884716.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : oxidoreductase, FAD-binding Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 331803 - 333170 bp Length : 1368 bp Strand : - Note : identified by match to protein family HMM PF01565; match to protein family HMM PF02913 DNA sequence : GTGGACCCCGCCCTGGCCGAACTGGCTGCTGACCTGCCTGCCCACGCGCTGCTCACCGATCCCGACCAGATCGAGGGATA TCGCCGTGACGCCGCCGCCGATCCACTCGCGGGCCGTCCGCGCGCCGTGGTCCGGGCGACCTGCACCGCCGATGTGCAGA GCGTCATGCGGTGGGCGACGCGTCATCGCGTCGCGGTGGTCCCCAGGGGCGCCGGGTCGGGGCTCTCCGGCGGCGCGAGC GCAGTCGACGGATGCGTCGTCCTGAGCACCGAGCGCATGCGTGCGATCCGGATCGACCCGGCGACCCGCGTGGCCGTCGT GCAACCCGGCGCGCTGAACGCCGAGGTCAAGCAGGCCGCAGCAGAGCACAGCCTGTGGTATCCGCCGGATCCGGCCTCGG TCGACATCTCCTCGATCGGCGGCAACGCCGCCACCAACGCGGGCGGCCTGTGCTGCGTGAAGTACGGCGTCACCACCGAC TACGTCCTCGGCATGCAGGTGGTGCTCGCCGACGGCACGGCCGTGACACTCGGCGGTCCGCGACTCAAAGACGTTGCGGG CCTGTCCCTGACCAAACTGTTCGTCGGTTCGGAGGGCATTCTCGGGGTGATCACCGAGGTCACCCTGCGGCTGATTCCGG CCCAGGCGTCGCCGTCCACCGTGGTCGCGATGTTCGACACGGTGCAGGATGCGGCCAACGCGGTCGTGGCCATCACGGCA TCGGTGCGGCCGGCCATGCTCGAGCTGATGGACCACGCGTCCATCAACGCCGTCGAGGACTACGGCCGCATGGGTCTGGA CCGGTCGGCGCAGGCGCTGCTGCTGGTCCAGTCCGACGCGCCGGGTGATGCCGCGTCCGAGGTGGCACACATCGTCGAGG CGTGCGAAAAATCAGGTGCCAGCGAGGTTTTCGCGACCGATGACCCAGCAGAAGGCGCCGGTTTCACGGCCGCGAGACGC CTGGTCGCGCCGGCACTCATGCAACTGGGTACGGTGCTGCTCGAAGACGTCACGGTGCCCATCCCGACGCTGCCCGCGCT GCTGGCAGGCATCAACCGGATCTCCGCCGAGTGCGACGTGCTGATCTGCGTCGTCGCGCATGCGGGCGACGGAAACACCC ACCCCGTCGTGGTTTTCGATCCCGACGATGCCGAATCGCAGGCCAGGGCCGAACGCGCCTTCAGCGAGGTCATGGACCTC GCGATCGCGATGGGCGGCACCATCACCGGTGAGCACGGCGTCGGCAGGCTCAAGAGAGATTGGCTGCCAAAGCAACTCGG CGACGACGTGATGTGGGTGACGCGCCGCGTCAAGGACGCCCTGGACCCGCTCGGCATCCTCAACCCGGGCGCTGTCCTGC GCCCATGA Protein sequence : MDPALAELAADLPAHALLTDPDQIEGYRRDAAADPLAGRPRAVVRATCTADVQSVMRWATRHRVAVVPRGAGSGLSGGAS AVDGCVVLSTERMRAIRIDPATRVAVVQPGALNAEVKQAAAEHSLWYPPDPASVDISSIGGNAATNAGGLCCVKYGVTTD YVLGMQVVLADGTAVTLGGPRLKDVAGLSLTKLFVGSEGILGVITEVTLRLIPAQASPSTVVAMFDTVQDAANAVVAITA SVRPAMLELMDHASINAVEDYGRMGLDRSAQALLLVQSDAPGDAASEVAHIVEACEKSGASEVFATDDPAEGAGFTAARR LVAPALMQLGTVLLEDVTVPIPTLPALLAGINRISAECDVLICVVAHAGDGNTHPVVVFDPDDAESQARAERAFSEVMDL AIAMGGTITGEHGVGRLKRDWLPKQLGDDVMWVTRRVKDALDPLGILNPGAVLRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 2e-52 | 42 |
