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Name : MSMEG_4122 (MSMEG_4122) Accession : YP_888404.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : major facilitator family protein transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 4202248 - 4203609 bp Length : 1362 bp Strand : - Note : identified by match to protein family HMM PF00083; match to protein family HMM PF07690 DNA sequence : ATGCCGGCCACTCCGACACGACCGGTCTCCATGCCGAAGGTCGCATTCGCTAGCTTCATCGGCACGTTGATCGAGTTCTT CGACATGTTCATCTTCAGCACCGCATCGGCGCTGGTCTTCAATAAAATTTTCTTCCCGTCGCTCGACCCGCTCGCCGGCA CCCTGGCAGCGTTCGCCGCATTCGGTGTCGCTTTCGTGGTAAGACCGCTCGGTGGCATCGTCTTCGGCCACTTCGGCGAC CGGGTGGGCCGGAAGACAATGCTTGTCACGAGTTTGCTTCTCATGGGCACGGGGACGGCGGCTGTCGGGGTACTGCCGAC GTACGCCCAGATCGGCATCTGGGCCCCGATCCTCCTGGTGGCAACTCGGCTTCTCCAGGGTCTCGCGATCGGCGGAGAGT GGAGCGGTGCTGTGCTCATGGCGGTAGAACACGCACCAAAGAGCCGCCGCGCCTTTTATGGCAGCTGGCCGTTGTGCGGA GTCCCGGGCGGGCTCGTCCTCGCAACTATCGCTTTCTATCTGATCGGGCTGCTGCCCGAAGAGCAGATGATGAGCTGGGG CTGGCGAGTGCCGTTTTTGGCCAGCGCGGTGCTGCTGCTGATCGGCCTGTACATCCGGTTGAGGATCTCGGAGTCGCCGG CCTTCAAGGCTGTCCAGCACAATAAGCGGGAGGCGAAGTTTCCGGCGCTCGAAGTTGTGCGTAGTGCTGGTAAAGGGGTG GTCATCGCCATACTGGCAATGGCTGCAAACAGTGTGTTCTTCTACATGGCAACGGTCTTCGCGTTGTCCTACGGCGAACG ACAGGGGGCCAGTCGTGGCCTGATCCTCATTGCCGTGATGTGCGCCGCAGCCGCCCAGATCATTACGCTGCCGATCGCTG CCGTGCTGGCAGACAGATACGGACGACGGCCGGTGATGATCGCAGGGTGCTTGATCGGTGCCGCATCGGCCTTTCCGATC TTCTGGCTTCTGGACACGACGAACTTCTTGGCGATTCTCGCGGCGATGGTCCTTGCCATACCTGTGGTTCATTCGCTGAC ATATGCGCCGATGGCGAGTTTCATCTCCGAACTGTTCGAAACCCGGCTCCGCTACAGCGGATCCGCGATGGGCTATCAGT TCGGTTCCATGCTCTGGAGTGCGCCCGTCCCGTTCGTCTCGGCGGCCTTGTTCGCCTGGGCGGGGGAGAGCTGGCCGCTG TCGGTGTACATGTTCATCGGGACGGTGGTGTCCATCGGCGCGATCTGGTGGGCCCGGGAGACGTTCCGAGACGAGATCAC CGAGCTCGACCAGCCTTCCGGGCCGGCTGCAACGTCGAGTGCTCCCCACCTGAGCGTCGAACACACGGGCTCATCAAGGT AG Protein sequence : MPATPTRPVSMPKVAFASFIGTLIEFFDMFIFSTASALVFNKIFFPSLDPLAGTLAAFAAFGVAFVVRPLGGIVFGHFGD RVGRKTMLVTSLLLMGTGTAAVGVLPTYAQIGIWAPILLVATRLLQGLAIGGEWSGAVLMAVEHAPKSRRAFYGSWPLCG VPGGLVLATIAFYLIGLLPEEQMMSWGWRVPFLASAVLLLIGLYIRLRISESPAFKAVQHNKREAKFPALEVVRSAGKGV VIAILAMAANSVFFYMATVFALSYGERQGASRGLILIAVMCAAAAQIITLPIAAVLADRYGRRPVMIAGCLIGAASAFPI FWLLDTTNFLAILAAMVLAIPVVHSLTYAPMASFISELFETRLRYSGSAMGYQFGSMLWSAPVPFVSAALFAWAGESWPL SVYMFIGTVVSIGAIWWARETFRDEITELDQPSGPAATSSAPHLSVEHTGSSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 6e-58 | 42 |
