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Name : MSMEG_4886 (MSMEG_4886) Accession : YP_889141.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : major facilitator family protein transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 4980943 - 4982244 bp Length : 1302 bp Strand : + Note : identified by match to protein family HMM PF00083; match to protein family HMM PF07690 DNA sequence : ATGGCCACGTCGACGGGGGTGCGGGTATCCCCGCTTCGCGTCGCGGTCGCGAGCTTCATCGGGACCACGGTCGAGTTCTA CGACTTCCTGATCTACGGGACCGCGGCCGCGCTCGTCTTCCCCAAGCTGTTCTTCCCACAGGCCTCGCCCGCGGCGGGCA TTCTCCTGTCGTTCGCGACATTCGGCGTCGGGTTCATCGCCCGACCGCTCGGCGGCATCGTGTTCGGGCATTTCGGCGAC CGCATCGGCCGCAAGCGCATGCTCGTGTACTCCCTTGTCGGCATGGGTGTCTCGACCGTGCTGATCGGCCTGCTGCCCTC CTACGCCCAGATCGGGCTGGCGGCCCCGGTCCTGCTGACCGTGCTGCGCCTGTGCCAGGGCTTCGCGGTCGGCGGCGAGT GGGGCGGCGCGACGCTCATGGCCGTCGAGCACGCGAGCGCCGACCGGCGTGGTTTCTACGGCGCCTTCCCCCAGATGGGC GCCCCGGCAGGCACGGCGTCGGCGACGCTGGCGTTCTTTTTGGCCTCGCAACTGCCCGACGCGCAGTTCCTCGCGTGGGG GTGGCGGCTGCCGTTCCTGTTCAGCGCCGCGCTGATCGTGATCGGTCTGGTGATCCGGCTCAAGCTGACCGAGAGCCCCG AGTTCGCCGCGGTGGTGCAGAACTCGGCGGTGCGGCGGATGCCGATCGTCGAGGCGTTCCGCAGGCACTGGCGCCAGATC GTGCTGGTTGCGGGCGCCTACCTGTCCCAGGGTGTGTTCGCCTACATCTGCGTGGCCTACCTGGTGTCCTATGCCACCAC CGCCGCCGGGATCGACCGCACCGCGGCACTTTTCGGTGTCTTCGTCGCCGCGCTGGTGGCCGTGGCGGCCTACCCGGCCT TCGGCGCGTGGTCGGATGTGGTGGGCCGCAAACGTCTGTTCCTGGTCGGCGTGGCCCTCATGGCGGCCTCGGTGTTCCCG GTGTTCGCGCTGATCGACACCGGCAGCGCGCTGCTGTTCGGCGTCGCGCTGGTCCTGGTGTTCGGCCTGGCGATGGCCCC GGCCGCCGGCGTGACGGGCGCGCTGTTCAGCCTCGCGTTCGACGCCGACGTCCGGTACAGCGGGGTGTCGATCGGCTACA CGCTGTCACAGGTCCTCGGGTCGGCGTTCGCGCCGACGATCGCCGCAGCGCTGTACGCCGCGGCGCAATCCAGTGACTCG ATCGCGTGGTATCTGGTTGCCGTGTCGGCGATCTCGGTGGTCGCCGGTACGCTGCTGCCGTCTGACCGCAGCGCACCAGA GGCCGCGGTGGTGAAGGGCTAG Protein sequence : MATSTGVRVSPLRVAVASFIGTTVEFYDFLIYGTAAALVFPKLFFPQASPAAGILLSFATFGVGFIARPLGGIVFGHFGD RIGRKRMLVYSLVGMGVSTVLIGLLPSYAQIGLAAPVLLTVLRLCQGFAVGGEWGGATLMAVEHASADRRGFYGAFPQMG APAGTASATLAFFLASQLPDAQFLAWGWRLPFLFSAALIVIGLVIRLKLTESPEFAAVVQNSAVRRMPIVEAFRRHWRQI VLVAGAYLSQGVFAYICVAYLVSYATTAAGIDRTAALFGVFVAALVAVAAYPAFGAWSDVVGRKRLFLVGVALMAASVFP VFALIDTGSALLFGVALVLVFGLAMAPAAGVTGALFSLAFDADVRYSGVSIGYTLSQVLGSAFAPTIAAALYAAAQSSDS IAWYLVAVSAISVVAGTLLPSDRSAPEAAVVKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 2e-59 | 42 |
