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Name : rnhA (MSMEG_5562) Accession : YP_889796.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 5649967 - 5650446 bp Length : 480 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : GTGAGCCAGGATCCCGTCATCATCCACACCGACGGCGGCTGCCGCCCCAACCCGGGCCCCGGCGGCTGGGGTGCGGTGCT ACGGCACCGCGAGCACGTCCGCGAGATGTTCGGCGGCGAAGCGGCCGTGACCAGCAACAACCGCATGGAGCTGACGGCCC CGATCATGGCGCTCGAGGCCTTGACCCGGCCCGTCACGGTGCACCTGTACACCGACAGCACCTACGTGCGCAACGGCATC ACCAAGTGGGTGCTGGGCTGGGAGCGCAACGGCTGGATGACCGCAGCCAAGCAGCCCGTGAAGAATGTCGACCTGTGGCA GCGCCTGCAGGCCGCGTGCGCGCGCCACCAGGTCGAGTGGTTCTGGGTGAAGGGGCACTCGGGCATCGGCGACAACGAGC TGGCCGACGAACTCGCGACCCGCGGACTGCAGGAGGCAGTGGGCCTCACCACCAGTAGTGCGGGTACTTCGCTCCGTTGA Protein sequence : MSQDPVIIHTDGGCRPNPGPGGWGAVLRHREHVREMFGGEAAVTSNNRMELTAPIMALEALTRPVTVHLYTDSTYVRNGI TKWVLGWERNGWMTAAKQPVKNVDLWQRLQAACARHQVEWFWVKGHSGIGDNELADELATRGLQEAVGLTTSSAGTSLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 9e-31 | 56 |
