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Name : MSMEG_6295 (MSMEG_6295) Accession : YP_890513.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : shikimate transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 6360654 - 6362012 bp Length : 1359 bp Strand : + Note : identified by match to protein family HMM PF00083; match to protein family HMM PF07690 DNA sequence : ATGACCAATCCCGCTGCGCCTGCGGCGCCGAACGAGCGACTCGTCCGGCGCGTGGCGCTCGCCAGTGGCATCGGATCGAT GCTCGAGTTCTACGACTTCTATCTCTACGGCGCACTGTCCGCGACGATCTTCGGCGCGCTGTACTTCCACAACGAGGACC CGGCGGTCGGCACACTGCTCGCCCTGGCCACCTTCGGCGTGGGTTTCGTGGCACGCCCGGTCGGCGGCATCATCGCAGGC CACTTCGGGGACAAGTTCGGGCGCAAGAGCGTTCTGATCGCGACGCTCGCGTTGATGGGTGTCTCCACCGTCGGCATCGG GATACTCCCGACCTACGCGTCGATCGGCACACTGGCCCCCGTCCTCCTGGTCACGCTGCGGATCCTGCAGGGGCTCGCAC ACGGAGGCGAATGGGGCGGCGCGTCCATCATGACCATCGAGCACGCGCCTGAGAGCCGCCGCGGTTTCTACGGCAGCTGC CCGCAGATGGGTATCTACGCGGGGTTGGTGCTCGCCAGTCTGGTGCTCGGCGGGTTCATGCTGCTGCCCGAGGAGCAGTT CCTGAGCTGGGGATGGCGCATACCGTTCATCCTCGGCGCCGTGCTCATGCTCGTCGGCCTGTGGCTACGCCGCGCGATCA CCGAATCCCCGGAGTTCGCAGCGGCAATGGCCACCCGGTCGATCGAACCCGAGCAGGAGAAGAAGCGCATCCCGCTGGTG GAAGCGTTCCGCACCGGGCGGCGGGGCATCTTCGTCACGTTCGCCGCGAAGGCCGCCGAAACCTGCACGTTCTACCTGAT CACGGTGTTCGCACTGACCCTGGCCAAAAACGGTGCCGGCGAATCGACCGCGCGCAACGGCATTCTCATCGCGTCCGTCG TCGCCATCATCACGATCGGGGCGTTCGGCGTGCTCGCCGACCGGGTCGGCACGCGAACCGTCTACATGGGTGGTGCAGGC TTCATGGTGCTGTTCGCGTTCCCGTTCTTCTGGCTCGCGGGCGCCAACTCCGGCTGGACGCTGCTGATCGCGTTGATCGT CGGCCTGGCGGTCGGGCACTCGTTGATGTACGCCGCACAGGCCAGTTACTTCTCGGCCCTGTTCAGCACGGAAGTCCGGT TCACCGGCGCCTCACTGGGTTACCAACTCGGCGCGGCCATCGTCGGTGGCTTCACGCCGCTCATCGCCGCGGCGCTGCTG CTTCGCAGCGACGGCGCAACCTGGCCCATCGCCACCTACATCGCCGGAGTCTGCCTGGTGAGTTATCTCGTCATGGCCGT CTGGGGCAAGGTGCGCGCCGACAATTCGGCGACCGCCGTTCCCGGGGTCGCCTCCGACGTCGCGGAGGTTCAGCGATGA Protein sequence : MTNPAAPAAPNERLVRRVALASGIGSMLEFYDFYLYGALSATIFGALYFHNEDPAVGTLLALATFGVGFVARPVGGIIAG HFGDKFGRKSVLIATLALMGVSTVGIGILPTYASIGTLAPVLLVTLRILQGLAHGGEWGGASIMTIEHAPESRRGFYGSC PQMGIYAGLVLASLVLGGFMLLPEEQFLSWGWRIPFILGAVLMLVGLWLRRAITESPEFAAAMATRSIEPEQEKKRIPLV EAFRTGRRGIFVTFAAKAAETCTFYLITVFALTLAKNGAGESTARNGILIASVVAIITIGAFGVLADRVGTRTVYMGGAG FMVLFAFPFFWLAGANSGWTLLIALIVGLAVGHSLMYAAQASYFSALFSTEVRFTGASLGYQLGAAIVGGFTPLIAAALL LRSDGATWPIATYIAGVCLVSYLVMAVWGKVRADNSATAVPGVASDVAEVQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 4e-67 | 41 |
