Gene Information

Name : CFF8240_1217 (CFF8240_1217)
Accession : YP_892375.1
Strain : Campylobacter fetus 82-40
Genome accession: NC_008599
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATP-binding protein LolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1200262 - 1200933 bp
Length : 672 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
TTGCAGCACATCGTAGAAGCTAAGGATCTAAATATCGGATATGAAAGAGATCAAAATGTTATAAATGGAGCAAATTTTAA
CATAAACGTGAATGATTTTGTATTTATAACAGGCAAAAGCGGCAGTGGAAAATCTACGCTAATAAAATCTATGTACGGAG
ATATATCTGTAAATAGAGGCAGTCTAATAGTATGTTTAAGCGAGCTTAAAGATATAAACAGATCAAGCTTGGCGCTTCTT
AGACAAAGAGTAGGAATAATTTTTCAAGATTTTAGACTTATAAACGAGTGGAATGTTGAAAAAAATGTAATGCTTCCTCT
TATAATTAAAGGTTATAACCAAAGTGTATGTAAAAAACAGGCCGCAAAGCTGCTAAATCATGTAAATTTACTTCATAAAG
CAGATAAATTTCCACTTGAACTAAGTGGCGGAGAGCAACAAAGAGTAGCTATGGCAAGGGCTTTAGCGCATAATCCTCAG
CTTCTGTTATGTGATGAGCCTACAGGTAGTTTGGATGAGTATTCAAGTGATGTGATATGGTCGCTTTTAAAGTCTGCTAG
AGATGGTCTTGGAACTTGCGTTGTTGTTGTAACTCATAAAATTCCATCTAGCTTGAGAACCGAGTATAGACATTTTGAAC
TATTAAATGGAGAGATAAATGAAATCATTTAA

Protein sequence : 
MQHIVEAKDLNIGYERDQNVINGANFNINVNDFVFITGKSGSGKSTLIKSMYGDISVNRGSLIVCLSELKDINRSSLALL
RQRVGIIFQDFRLINEWNVEKNVMLPLIIKGYNQSVCKKQAAKLLNHVNLLHKADKFPLELSGGEQQRVAMARALAHNPQ
LLLCDEPTGSLDEYSSDVIWSLLKSARDGLGTCVVVVTHKIPSSLRTEYRHFELLNGEINEII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-21 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFF8240_1217 YP_892375.1 lipoprotein releasing system ATP-binding protein LolD CP001581.1.gene798.p Protein 6e-21 41
CFF8240_1217 YP_892375.1 lipoprotein releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 7e-18 41