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Name : CFF8240_0346 (CFF8240_0346) Accession : YP_891548.1 Strain : Campylobacter fetus 82-40 Genome accession: NC_008599 Putative virulence/resistance : Unknown Product : sodium-dependent transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0471 EC number : - Position : 315785 - 317443 bp Length : 1659 bp Strand : + Note : identified by match to protein family HMM PF00939; match to protein family HMM TIGR00785 DNA sequence : ATGGCAAATCCAAACATTCCTGTGGATAAAAAGACCAGTACTGTTCAGATTATCGGTCTTTTTGGTGGTATTTTGGCTGC TCTTTTGGTGTATTATATGATGCCAAGTAGTGCTGGAGATATAGCAAACGCCGCTGCAAACGGCAAAAAGTTAAATATAG AAGGTCTTCCTATAGTAGCTGCTGTGGCTGTGCTGATGGGTATATGGTGGATGAGCGAGGCTATAGCACTTCCTGCTACT GCTCTTTTGCCTATGGTTTTGTTTCCGCTTTTAGGTGTCGATAGCTTTAAATCAGCTGCGGCTCCGTACGCTTCAGATAC TATATATCTGTTTATGGGTGGGTTCGTTTTAGCTCTTGCTATGCAAAAGTGGAATCTGCATACTAGGATAGCTCTTGGTA TTGTGTTACTAATCGGAACAAGTCCGCGCCGTTTGGTTGCTGGATTTATGGTGGCGACCGGATTCATGTCTATGTGGGTT AGCAACACTGCGACCGCGGTTATGATGCTTCCAGTAGGACTTTCTGTTTTGCACTTAGTCAGTAAACTTACTACCGGTAA GGATGACGGTACAGTGGAGGGCGATATGAGACATCTTGATGAGATAGCTCGTAAAGGCACTCAAGGCGGTATAGCAAGTG CTGTGATCCATAAAGGTAAAGATATAGTAGAAGAAGTAAAAGCAAGAACAAGCTCATTTACTTCAAATTTCGGCATTGCC TTAATGCTCGGTATCGCTTACGCCGCTTCTATCGGCTCTCTTGGTACTATCATAGGAACTCCGCCAAATGCACTTCTTGT AGCTCATATGAAAAACGAATTCGGCGTAGAGATTGGTTTTGGCCAGTGGATGATAATGGGCGTTCCTTTAGCCGTAACTA TGCTTGCTATTTGTTGGGCTATACTTGTTTATTGGTTATTTCCGCCTGAGATAGACGAGATACCAGGAGGTAAAGAAATC ATTCATGAAGAGTACAAAAAACTCGGAAATATGAGCAGCGCTGAGTGGCTAGTAGGTGGCGTGTTCATATCTGCTGCGCT TTGCTGGATATTTCTTGGTTTTATACTAAAAGCATATGGGATAAAAGTAGGCAGTCTTGATACGATCGTCGCTATGAGCG TCGCTGTATTGCTCTTTATCATTCCTGCAAACAAAAGCGGAGAGAGACTTATAGACTGGGATAGCGCTAAGAAACTTCCG TGGGATATCCTTATATTATTCGGTGGAGGTCTTGCACTTTCTGCTCAATTTAGCAAAACAGGATTATCTTTATGGATAGG ACATCAAGTTTCGGCTTTAGGAACTATGCCTATACTTGCTGTTATAGTGGCAGTTACCGCTCTTGTTATATTCTTAACAG AGATCACTTCAAATACCGCTACTGCAGCGGCGTTCTTGCCGGTTATAGCCGGGGTTGCTATAGGTTTAGGATATGAGGGA AGCAATGTTATGCTATTTACGGTGCCTGTTGCTTTAGCCGCTACTTGTGCATTTATGCTACCTGTCGCGACTCCGCCAAA TGCTATAGCTTACGGCTCGGGATACGTGCGGATCAGCGATATGATAAAAGCTGGATTATGGTTAAATATAGTAGGTATAT TCTTGATAACTCTTACTGTTATGTTCTTGACTACGACTGTATTTGGTCTAAAGATTTAA Protein sequence : MANPNIPVDKKTSTVQIIGLFGGILAALLVYYMMPSSAGDIANAAANGKKLNIEGLPIVAAVAVLMGIWWMSEAIALPAT ALLPMVLFPLLGVDSFKSAAAPYASDTIYLFMGGFVLALAMQKWNLHTRIALGIVLLIGTSPRRLVAGFMVATGFMSMWV SNTATAVMMLPVGLSVLHLVSKLTTGKDDGTVEGDMRHLDEIARKGTQGGIASAVIHKGKDIVEEVKARTSSFTSNFGIA LMLGIAYAASIGSLGTIIGTPPNALLVAHMKNEFGVEIGFGQWMIMGVPLAVTMLAICWAILVYWLFPPEIDEIPGGKEI IHEEYKKLGNMSSAEWLVGGVFISAALCWIFLGFILKAYGIKVGSLDTIVAMSVAVLLFIIPANKSGERLIDWDSAKKLP WDILILFGGGLALSAQFSKTGLSLWIGHQVSALGTMPILAVIVAVTALVIFLTEITSNTATAAAFLPVIAGVAIGLGYEG SNVMLFTVPVALAATCAFMLPVATPPNAIAYGSGYVRISDMIKAGLWLNIVGIFLITLTVMFLTTTVFGLKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0179 | NP_938571.1 | hypothetical protein | Not tested | Not named | Protein | 2e-105 | 52 |
