Gene Information

Name : Ppro_2369 (Ppro_2369)
Accession : YP_902033.1
Strain : Pelobacter propionicus DSM 2379
Genome accession: NC_008609
Putative virulence/resistance : Virulence
Product : type I secretion system ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 2562745 - 2564976 bp
Length : 2232 bp
Strand : -
Note : KEGG: rso:RSp0292 probable cyclolysin-type secretion composite ATP-binding transmembrane ABC transporter protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter, transmembrane region; ABC transporter related; peptidase C39, bacteriocin pro

DNA sequence :
ATGGACTCCGGCCTAGCTTCCCTGCTGATCATCGCCGGACTGCACGGCATTGCCGCCGACGAGGCGAAACTGAGACATGA
ATTGGGCGCCGGGCCGTTTTCCACCGAGAAGCTGCTGCTGGCGGCAAAAAGCCTGGGGATGAAGGCCCGGCTTGTGGCCC
AGCCGGTGGAGCGACTGGACCGCGCTCCGCTGCCGGCAATCGCCCTGGATACTGCCGGCGGCTTCTTCATTCTGGCCAAA
TATGACCAAGGCAAGAGTGGAGAGCCGGGTGTGGCCAAGGCCGCCGCACCCCGTCTGCTGATCCAGCATCCTGGGAAACC
GCCCGCCATTCTCGACCTGGACGCGTTTCTGGCCTGCTGGTCCGGCCAGTTGATCTTTCTCACCTCCAAGGCCACCTACG
CCGGTGAGATGGCCAACTTCGATTTCAGCTGGTTCATCCCCGCCGTGGTCAAATACCGCAGGCTGCTGGGTGAAATACTG
CTGATCTCGTTCATCCTGCAGCTTATCGGCCTGGCCACCCCTCTGTTTTTTCAGGTGGTGATGGACAAGGTGCTGGTCAA
TCACGCCATGAAGACGCTCAACGTGATTGCCATCGGCCTGGTCATGGCCACACTGTTCGAATCCCTGCTGACCGGTATCC
GCACCTACGTTTTTGCCAACACCAGCAGCAAGATCGATGTGGAACTGGGCGCCAGGCTGTTCAGGCACCTGCTCAACCTG
CCCGTAGCCTACTTCCAGGCGCGCAGAGTCGGCGATTCCGTGGCGCGCATCCGCGAACTGGAGAACATCCGCAGCTTCCT
CACCGGCAATGCCATCACCGTTGTCCTGGATCTGATGTTCTCGGTCGTGTTTCTGGGGGTGATGCTCTGGTACAGTAGAC
TGCTGACCCTAATCGTGGTCGTCTCCATCCCCTGTTATATCGTCCTCTCCCTGGTCTTTACGCCGATCATCCGCTCCCGT
CTCAACGTCAAGTTCAACCGCGGCGCCGAGAACCAGTCATTCCTGGTGGAAACCATCAGCGGGATAGACACCGTGAAGGC
CATGGCGGTCGAGCCGCGCTGGGTTTTTACCTGGGAGCGGCAACTGGCCTCCTATGTTGCCTCCTCCCTCTCCGTCAACA
ACGCAAGCATGCTGGCCGGCGGAGGGGTGACCCTGATCAGCAAGCTGGTAACCGCGGCAATCATGTGGGTAGGCGCCGGC
CTGGTCGTCGACAACAAGATGACCGTCGGCGAACTGGTCGCCTTCAACATGCTGTCCGGCCAGGTCTCGTCACCGATCCT
GCGCCTGGCGCAACTGTGGAACGACTTCCAGCAGGTGGGGATTTCCATGAGCCGCCTGGGTGACATCCTCAATGCCCGGA
CCGAACTATCCGGTCAGAAGAGCCGTATTCCCCGCATTGCCGGAGCCGTGGAATTCGATCAGGTGTCATTCCGCTACCGC
CCTGACACGCCGGATGTCATCCGCGCCGTCAACCTGAAGATCGCGCCGGGTGAAGTCATCGGCATCGTCGGCCGGTCCGG
CTCGGGGAAATCCACGCTCACCAAACTGGTGCAGCGTCTCTTTGTCCCCGACCGCGGCCGGGTACTGGTGGATGGACAGG
ATATCGCCATCATCGACACCACCTCCCTGCGCCACCAGGTCGGCATGGTCCTTCAGGAAAACATGCTCTTCAACCGCAGT
ATCCGCGACAACATCGCCCTTTCCAATCCGGCGCTGCCGATCGAGGCCATCATCGAGGCTGCCAAGCTTGCCGGGGCGCA
CGAATTCATCTGTGAATTGCCCGAGGGGTACGACACCATGGTGGGAGAACATGGCTCCGGCCTGTCGGGCGGACAGAGGC
AGCGCATCGCCATTGCCCGCGCCCTGATCAGCAACCCGCGCATCCTGATCTTCGACGAAGCCACCAGCGCACTGGACTAC
GAATCGGAAAAAATCATCCAGGACAACATGCGCCAGATTTGCGCGGGCAGAACGGTGCTGATCATTGCCCACCGCCTGTC
GGCGGTCAGGGATGCCCACCGCATCATCGTCATGGAGCGGGGGCAGATCGCCGAGCAGGGGAGCCACCAGGAGTTGCTGC
TGAATCCGAACGGCATTTACACCCATCTGTACCGGTTGCAGATGGGCAACCAGGATCGGTCCGCGCACGTGATGCCGACT
CCAATGCCTACCGCGACTCCGTCGCCCATACGCTATGCTCCGGTAGTCAACGCAGCAGGTGAAATAGCATGA

Protein sequence :
MDSGLASLLIIAGLHGIAADEAKLRHELGAGPFSTEKLLLAAKSLGMKARLVAQPVERLDRAPLPAIALDTAGGFFILAK
YDQGKSGEPGVAKAAAPRLLIQHPGKPPAILDLDAFLACWSGQLIFLTSKATYAGEMANFDFSWFIPAVVKYRRLLGEIL
LISFILQLIGLATPLFFQVVMDKVLVNHAMKTLNVIAIGLVMATLFESLLTGIRTYVFANTSSKIDVELGARLFRHLLNL
PVAYFQARRVGDSVARIRELENIRSFLTGNAITVVLDLMFSVVFLGVMLWYSRLLTLIVVVSIPCYIVLSLVFTPIIRSR
LNVKFNRGAENQSFLVETISGIDTVKAMAVEPRWVFTWERQLASYVASSLSVNNASMLAGGGVTLISKLVTAAIMWVGAG
LVVDNKMTVGELVAFNMLSGQVSSPILRLAQLWNDFQQVGISMSRLGDILNARTELSGQKSRIPRIAGAVEFDQVSFRYR
PDTPDVIRAVNLKIAPGEVIGIVGRSGSGKSTLTKLVQRLFVPDRGRVLVDGQDIAIIDTTSLRHQVGMVLQENMLFNRS
IRDNIALSNPALPIEAIIEAAKLAGAHEFICELPEGYDTMVGEHGSGLSGGQRQRIAIARALISNPRILIFDEATSALDY
ESEKIIQDNMRQICAGRTVLIIAHRLSAVRDAHRIIVMERGQIAEQGSHQELLLNPNGIYTHLYRLQMGNQDRSAHVMPT
PMPTATPSPIRYAPVVNAAGEIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 54
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 54
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ppro_2369 YP_902033.1 type I secretion system ATPase VFG1269 Protein 0.0 65
Ppro_2369 YP_902033.1 type I secretion system ATPase VFG0907 Protein 0.0 54
Ppro_2369 YP_902033.1 type I secretion system ATPase VFG0841 Protein 0.0 54
Ppro_2369 YP_902033.1 type I secretion system ATPase VFG1557 Protein 0.0 54
Ppro_2369 YP_902033.1 type I secretion system ATPase VFG1501 Protein 0.0 54