|
Name : Rmag_1005 (Rmag_1005) Accession : YP_904182.1 Strain : Candidatus Ruthia magnifica Cm Genome accession: NC_008610 Putative virulence/resistance : Unknown Product : protein translocase subunit secF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 1071387 - 1072313 bp Length : 927 bp Strand : - Note : TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: noc:Noc_2349 SecF protein DNA sequence : ATGAGCTTAAAAGCACTAAACATTCCAACGATTGACTTTATTGGTAAGCGCACTTATGCCGTTATATTTTCGGTGTTATT GGTTACTGCTAGTATTGTTTCATTGACCATGAACGGATTTAAGCTAGGTATTGATTTTACTGGCGGTACTTTAATTGAAG TAGGCTATCAACAAGATGTTGATTTATCTGAGATTAGAGCCATGCTGGCTAAGGCAAATTTTAAAGGAGCCAATGTCCAA TATTTTGGTTCAATTAATGAGGTTTTAATTCACCTAGAGCCACAATCAATTTCTAGTGCTAAACTAAGTTCAAAAATCAT CCATTTATTAGGCGATGATGTTAATATTCGTCGAATCGAATTTGTAGGCCCTAAAGTGGGCGATGAACTCACTAATGATG GTGGTTTAGCAATGCTATATGCGTTGATTGGTATTTTGATTTATGTGACAATACGTTTTGAATATCGTTTTTCATTAGGC TCAATTGCTACCCTTATTCATGATGTTATTATTATCCTAGGTTTTTTCTCATTATTTCAAATTGAGTTTGATTTAACGGT GTTGGCTGCTATATTAGCTGTCATTGGCTATTCTTTAAATGATACTATTGTAGTGTTTGACCGAATTCGTGAAAATTTCT TATCAACACGTTATGTTGATTCTCCTAAGATTATTAATGATGCACTTAATCAAACATTATCTAGAACAATAATGACCTCT TTAACTACCTTATTGGTATTGTTAGCGCTGTTCTTTTTAGGTGGTGAAATTATCCATAATTTTGCTTTAGTATTACTAAT TGGCGTGGTGGTGGGCACTTATTCTTCTATTTATGTCGCCAGTTCAATAATTCTTGCATTAGGCATTACTAAGGAAGATT TATTGCCATCTGAAAAAGAAAAGAAAGCACTTAACTCACGACCATAG Protein sequence : MSLKALNIPTIDFIGKRTYAVIFSVLLVTASIVSLTMNGFKLGIDFTGGTLIEVGYQQDVDLSEIRAMLAKANFKGANVQ YFGSINEVLIHLEPQSISSAKLSSKIIHLLGDDVNIRRIEFVGPKVGDELTNDGGLAMLYALIGILIYVTIRFEYRFSLG SIATLIHDVIIILGFFSLFQIEFDLTVLAAILAVIGYSLNDTIVVFDRIRENFLSTRYVDSPKIINDALNQTLSRTIMTS LTTLLVLLALFFLGGEIIHNFALVLLIGVVVGTYSSIYVASSIILALGITKEDLLPSEKEKKALNSRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 1e-55 | 45 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 6e-56 | 45 |
