Gene Information

Name : Rmag_0315 (Rmag_0315)
Accession : YP_903564.1
Strain : Candidatus Ruthia magnifica Cm
Genome accession: NC_008610
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0247
EC number : -
Position : 342958 - 344082 bp
Length : 1125 bp
Strand : +
Note : PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: neu:NE0673 glycolate oxidase (iron-sulfur subunit) protein

DNA sequence : 
ATGCGAACCATTGATATTCAAAATCTTAAAGCTAATGATATTATTAGAAAATGTGTCCATTGTGGATTTTGTCTAGCTAC
TTGTCCGACTTATCAATTATTAGGCGATGAATTAGATTCACCTCGTGGACGTATTTATTTGATTAAGTCGGCTTTGGAAA
ATCATCATTTTTCCAAGCAAAGTATTATTCGTTTGGATCGTTGTTTAACATGCAGGTCATGTGAAACCACTTGTCCATCA
GGTGTTGAATATGGTCAATTAGTAAATATTGGGCGTGAATTTGTAGAACAAAAACGTCCATTTTGGCAAAAGGTATCTCG
ATACTTTATTCGTCAATTTTTAACCACTCCTATTTTATTTAATCCAATTGGGTTTATTTTTAGGCATTCTAAAATAAAAG
GAAAACCTATTAAACCTATTGTAAAAATTGGCAAAGTTTTGTTGTTAGGTGGTTGTGTGCAATCTGTACTTGCGCCTAAT
ATTAACCATAGCATTAAAAATATTCTAGCAAAATTAGGTTATGAAACTGTAGAAACACCACAAAAACAATGTTGTGGTGC
GATTGATCAACATTTAAGTGCTAGTCACGATGCCTTGGCTAAAATCAAGCGAAATATTGATGCTTGGCTTAAAATTGAGT
CTGAGGTAATTATCTCTAGTGCTAGTGGTTGTGGATTAATGGTTAAAGATTACGTTTCTATGTTTGAAGTATTAGACCCT
TATTATCAAAAAGCACAGCTTATTGTTAATAAGACTAAAGACATTGCTGAGTTTTTGTCTGATAAAGATTTAAGTCAGCT
TAATTTAGAGAAAGTTAATATTTCTTATCACGAGCCTTGTACATTACAACACGGACAACAATTAGGCGGATTGGTTGATT
CTATTTTAAATTTACTTGGTTATCAGCAAACACCTATTGTTGATTCACATTTATGTTGTGGTTCAGCGGGTACTTATTCA
ATTTTTCAGCCGAAACTCTCTCAACAGTTAAAAATTAACAAGTTACAAAACTTGCAATCAGATAATCCAGAAGTGATTGT
TACTGCAAATATAGGTTGCTTAATACACTTACAAAAAGGCACTAAAATACCTATTAAACATTGGGTAGAATTATTAGACA
ATTAG

Protein sequence : 
MRTIDIQNLKANDIIRKCVHCGFCLATCPTYQLLGDELDSPRGRIYLIKSALENHHFSKQSIIRLDRCLTCRSCETTCPS
GVEYGQLVNIGREFVEQKRPFWQKVSRYFIRQFLTTPILFNPIGFIFRHSKIKGKPIKPIVKIGKVLLLGGCVQSVLAPN
INHSIKNILAKLGYETVETPQKQCCGAIDQHLSASHDALAKIKRNIDAWLKIESEVIISSASGCGLMVKDYVSMFEVLDP
YYQKAQLIVNKTKDIAEFLSDKDLSQLNLEKVNISYHEPCTLQHGQQLGGLVDSILNLLGYQQTPIVDSHLCCGSAGTYS
IFQPKLSQQLKINKLQNLQSDNPEVIVTANIGCLIHLQKGTKIPIKHWVELLDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcF CAE85243.1 GlcF protein Not tested PAI V 536 Protein 1e-76 44