Gene Information

Name : Cpha266_1100 (Cpha266_1100)
Accession : YP_911565.1
Strain : Chlorobium phaeobacteroides DSM 266
Genome accession: NC_008639
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1245802 - 1246512 bp
Length : 711 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE0257 ABC-type transport systems, involved in lipoprotein release, ATPase components

DNA sequence : 
ATGAATGACAGGATTATTGCACAACTGATAAATGTCTCGAAATATTACGGCAGCGGAGAAGGTCGTGTTACCGCGCTCAA
TCATGTCAATCTTTCTTTTTTTCGAGGAGATATCGTCGTCCTTGTCGGACTGTCAGGAAGCGGCAAATCAACCCTGCTTC
ATCTTCTTGGCTGCATTGACAAGCAGGATGAGGGGAACGTCATCATCGACGGCATTGATACCTCATCAATGAGCCTCGAA
CAACTCGCGAATCTGCGGCTTAGCAAGATCGGGTTTGTCTTTCAGTCATTCAATTTAATTCCGGTTCTTACGGCTTATGA
GAATGTCGAACTCCCTCTTCTTTTTAAAGACATGGATAAAAAGAGTATCCGCCAAAGAGTCGATGAAGTGCTTGACGAGG
TAGGGCTTCATGACAGAAAACACCACTATCCAAGAGAGATGTCTGGCGGACAGCAGCAAAGGGTTGCCATTGCAAGGGCT
CTGGTAAGTAAACCCGCTCTGATTCTGGCAGATGAACCGACAGCCAATCTTGACAGTAAAACAGGTGCCGGGATTCTTGA
TCTGTTGATGAGCCTCAACAAGAAGGAACATATCACCATCGTTGTCTCTTCTCATGATTCTGTCGTGCTCGACAGAATAA
AAAGCGTTGTTCATATCAGGGACGGAAAGATAATGGTTGACGAAACAGCTCTTCACAACCATCTGGCCTGA

Protein sequence : 
MNDRIIAQLINVSKYYGSGEGRVTALNHVNLSFFRGDIVVLVGLSGSGKSTLLHLLGCIDKQDEGNVIIDGIDTSSMSLE
QLANLRLSKIGFVFQSFNLIPVLTAYENVELPLLFKDMDKKSIRQRVDEVLDEVGLHDRKHHYPREMSGGQQQRVAIARA
LVSKPALILADEPTANLDSKTGAGILDLLMSLNKKEHITIVVSSHDSVVLDRIKSVVHIRDGKIMVDETALHNHLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cpha266_1100 YP_911565.1 ABC transporter CP001581.1.gene598.p Protein 1e-41 46
Cpha266_1100 YP_911565.1 ABC transporter CP001581.1.gene798.p Protein 7e-41 44
Cpha266_1100 YP_911565.1 ABC transporter NC_012469.1.7686878. Protein 7e-40 44
Cpha266_1100 YP_911565.1 ABC transporter NC_008702.1.4606598. Protein 2e-35 42