Gene Information

Name : rnhA (Cpha266_0581)
Accession : YP_911061.1
Strain : Chlorobium phaeobacteroides DSM 266
Genome accession: NC_008639
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 652406 - 652846 bp
Length : 441 bp
Strand : -
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
ATGCAGAAAAAAATAATCGTATACACTGACGGCGCTTGCAGCGGCAACCCCGGAAAAGGCGGCTGGGGAGCCCTGCTTAT
GTACGGCGCCTCAACTCGGGAAATCTCGGGTTACTCGCCTGCCACCACCAACAACCGTATGGAGCTCAGTGCAGCAATAG
AAGCACTCGAAACACTCAAGGAGCCCTGTATTGTGCACCTCTACAGCGATTCAAGCTACCTTGTCAATGCGATAAACGAA
GGATGGCTTAAACGCTGGACAGCCAATAACTGGAAAACCGCAGCAAAAAAAAGTGTTGAAAACATCGATTTGTGGCAAAA
AATCCTGACGTTGATTAAATTACATGACGTTACCTTTCATAAAGTTAAGGGCCACAGTGACAACCCCTACAACAACCGTT
GTGATGAACTGGCTCGTCAAGCCATAAAAAACAACAGATAA

Protein sequence :
MQKKIIVYTDGACSGNPGKGGWGALLMYGASTREISGYSPATTNNRMELSAAIEALETLKEPCIVHLYSDSSYLVNAINE
GWLKRWTANNWKTAAKKSVENIDLWQKILTLIKLHDVTFHKVKGHSDNPYNNRCDELARQAIKNNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 3e-25 46