Name : rnhA (Cpha266_0581) Accession : YP_911061.1 Strain : Chlorobium phaeobacteroides DSM 266 Genome accession: NC_008639 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 652406 - 652846 bp Length : 441 bp Strand : - Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGCAGAAAAAAATAATCGTATACACTGACGGCGCTTGCAGCGGCAACCCCGGAAAAGGCGGCTGGGGAGCCCTGCTTAT GTACGGCGCCTCAACTCGGGAAATCTCGGGTTACTCGCCTGCCACCACCAACAACCGTATGGAGCTCAGTGCAGCAATAG AAGCACTCGAAACACTCAAGGAGCCCTGTATTGTGCACCTCTACAGCGATTCAAGCTACCTTGTCAATGCGATAAACGAA GGATGGCTTAAACGCTGGACAGCCAATAACTGGAAAACCGCAGCAAAAAAAAGTGTTGAAAACATCGATTTGTGGCAAAA AATCCTGACGTTGATTAAATTACATGACGTTACCTTTCATAAAGTTAAGGGCCACAGTGACAACCCCTACAACAACCGTT GTGATGAACTGGCTCGTCAAGCCATAAAAAACAACAGATAA Protein sequence : MQKKIIVYTDGACSGNPGKGGWGALLMYGASTREISGYSPATTNNRMELSAAIEALETLKEPCIVHLYSDSSYLVNAINE GWLKRWTANNWKTAAKKSVENIDLWQKILTLIKLHDVTFHKVKGHSDNPYNNRCDELARQAIKNNR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 3e-25 | 46 |