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Name : Pden_3977 (Pden_3977) Accession : YP_917739.1 Strain : Genome accession: NC_008687 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1115530 - 1117491 bp Length : 1962 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: rsp:RSP_2633 cytochrome c maturation protein, CcmF DNA sequence : ATGATCGCTGAACTTGGCCATTTCGCACTGATCCTTGCCTTTGCCGTGGCCATCTTCCAGATGATCGTGCCGATGATCGG CGCCGGCAAGGGCTGGGGCGGCTGGATCGACTCCGCGCGCCCCGCCGCGCTGGCGCAATTCGGGCTGGTCGGCATTTCCT TCGTCGCGCTGACCATGGCCTTCGTGACCTCGGACTTCTCGGTCGCGCTGGTCTACCAGAACTCGCATACCGCCAAGCCG ATGATCTACAAGATCAGCGGCGTCTGGGGCAACCACGAGGGCTCGATGCTGCTCTGGGTGCTGATCGTGGCGCTGTTCGG CGCGATGGCGGCGATATTCGACGCGAACCTGCCGCCCAAGCTGCGGGCGCGGGTTCTGGCGGTGCAGGGCTCGATCGGCG CGGCGTTCCTGGGCTTCATCCTGTTCACCTCGAACCCCTTCCTGCGCATGGCGAGCCCGCCTTTCGACGGGCGCGACCTG AACCCGCTCTTGCAGGACCCGGGCCTCGCCTTCCATCCGCCCTTCCTCTACCTCGGCTATGTCGGGCTCAGCATGGCCTT CAGCTTTGCCGTGGCCGCGCTGATCGAGGGGCGGGTCGACGCCGCCTGGGCGCGCTGGGTCAGGCCATGGACGCTGGCGG CCTGGGTCTTCCTGACCATCGGCATCGCGCTGGGTTCGTGGTGGGCCTATTACGAGCTGGGCTGGGGCGGCTTCTGGTTC TGGGATCCGGTGGAAAACGCCAGCTTCATGCCCTGGCTGATCGCCGCCGCGCTCCTGCATTCCGCCATCGTGGTGGAAAA GCGCGAGGTGCTGAAAAGCTGGACCATCCTGCTGGCGATCATGGCTTTCGGCTTTTCGCTGATCGGCACCTTCATCGTGC GCTCGGGGGTCATCACCTCGGTCCACAGCTTTGCCAGCGACCCCAAGCGCGGGGTGTTCATCCTGGCGATCCTGGCGTTC TTCGTCGGCGGCGCGCTGCTGCTTTACACCTTCCGCGCCGCCTCGATGCAGGCGCGAGGCGCCTTCACCCCAGTCTCGCG CGAGGGGGCGCTGGTGCTCAACAACATCCTGCTGGCGGTCTCGACCTTCGTGGTCTTCATCGGCACCGTCTGGCCCCTGG TGGCCGAGATGCTGTGGGACCGCAGGCTGTCGGTGGGCGCCCCCTTCTTCGAGCAGGCCTTCACGCCCTTCATGGTGGCG CTGGCGATCATCCTGCCCGTGGGCGCGATCCTGCCGTGGAAGCGCGGCAAGCTCAAACGCGTGCTGTATCCGCTGCGCGG CGCGCTGGTCTTTGCCGGGGCGGTGATGGCGCTGGTCTTTGCCGTCTCGACCGGCCATTCGGCGCTGGCGGTGATCGGCG CCGGGCTGGGTGCCTGGCTGGTTGCGGGCGCGGTCGTGGACCTGTGGCTGCGCACCGGCAACTCCGGCCTGTCCCGCCTG CGCCGGCTGCCGCGCGCTGATTGGGGCAAGGCCGTGGCCCATGCCGGGCTGGGCGTCACCTTCATCGGCATCAGCCTGCT GATGGCCTGGCAGGTCGAGGACATCCGCGTGGCCCGCATCGGCGAGACCTTCACCGTCGCCGGCTACGACATCACCCTGG AAAGCGTGGAAGAGCGCCCCGGCCCGAACTACAACTCGATCACGGCCGCGATGACGGTGGATCGCAACGGGCAGCAGGTT GCGCTGCTGCATCCCGAAAAGCGGGTCTATCCGGTGCAATCCATGCCCACGACCGAGGCGGCGATCCAGAGCGGCCCGTT CCGCGACCTCTACCTGGTCATCGGCGACGAACAGCAGGGCGGCGGCTGGGCGGTGCGCGTCTATATCAAGCCCTTCGCCA GCTGGATCTGGCTGGGCTCGGCGCTGATGGCGCTTGGCGGCTTCATCAGCCTGTCGGACCGGCGCTATCGCGTCGCCGCC GGCGCCCGCCATGCCCGCACCGCACCCCAGCCGGCGGAGTAG Protein sequence : MIAELGHFALILAFAVAIFQMIVPMIGAGKGWGGWIDSARPAALAQFGLVGISFVALTMAFVTSDFSVALVYQNSHTAKP MIYKISGVWGNHEGSMLLWVLIVALFGAMAAIFDANLPPKLRARVLAVQGSIGAAFLGFILFTSNPFLRMASPPFDGRDL NPLLQDPGLAFHPPFLYLGYVGLSMAFSFAVAALIEGRVDAAWARWVRPWTLAAWVFLTIGIALGSWWAYYELGWGGFWF WDPVENASFMPWLIAAALLHSAIVVEKREVLKSWTILLAIMAFGFSLIGTFIVRSGVITSVHSFASDPKRGVFILAILAF FVGGALLLYTFRAASMQARGAFTPVSREGALVLNNILLAVSTFVVFIGTVWPLVAEMLWDRRLSVGAPFFEQAFTPFMVA LAIILPVGAILPWKRGKLKRVLYPLRGALVFAGAVMALVFAVSTGHSALAVIGAGLGAWLVAGAVVDLWLRTGNSGLSRL RRLPRADWGKAVAHAGLGVTFIGISLLMAWQVEDIRVARIGETFTVAGYDITLESVEERPGPNYNSITAAMTVDRNGQQV ALLHPEKRVYPVQSMPTTEAAIQSGPFRDLYLVIGDEQQGGGWAVRVYIKPFASWIWLGSALMALGGFISLSDRRYRVAA GARHARTAPQPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-112 | 49 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 4e-124 | 47 |
