Gene Information

Name : Noca_4030 (Noca_4030)
Accession : YP_925214.1
Strain : Nocardioides sp. JS614
Genome accession: NC_008699
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 4254057 - 4254371 bp
Length : 315 bp
Strand : -
Note : PFAM: microcompartments protein; KEGG: dsy:DSY4991 hypothetical protein

DNA sequence : 
GTGGCAAATCCCCAGATGATCGCACTTGGCATGATCGAGACCCGCGGTCTCGTGGGCTCGATCGAGGCCGCCGACGCCAT
GGTGAAGGCGGCGAACGTCACCCTGATCGGCAAGGAGCACATCGGTGGCGGCTACGTCACCGTGATGGTCCGCGGTGACG
TCGGCGCGGTCAAGGCCGCCACGGACGCCGGCGCCGCGGCCGCGCAGCGCGTCGGTGACCTGGTCAGCGTCCACGTCATC
CCCCGCCCGCACGGCGACGTCGAGTTCATCCTGCCCTCGCAGAACGCCGGGACCGCGCCGACCCCCACCAAGTGA

Protein sequence : 
MANPQMIALGMIETRGLVGSIEAADAMVKAANVTLIGKEHIGGGYVTVMVRGDVGAVKAATDAGAAAAQRVGDLVSVHVI
PRPHGDVEFILPSQNAGTAPTPTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-10 64
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 8e-12 62
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-10 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Noca_4030 YP_925214.1 microcompartments protein VFG1597 Protein 7e-11 64
Noca_4030 YP_925214.1 microcompartments protein VFG1596 Protein 3e-12 62
Noca_4030 YP_925214.1 microcompartments protein VFG1598 Protein 5e-11 60