Gene Information

Name : Sama_1808 (Sama_1808)
Accession : YP_927683.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Unknown
Product : glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0057
EC number : -
Position : 2200983 - 2201996 bp
Length : 1014 bp
Strand : +
Note : KEGG: son:SO2345 glyceraldehyde 3-phosphate dehydrogenase

DNA sequence :
ATGACTATCCGCGTAGCAATTAACGGCTATGGCCGTATCGGCCGCAACGTACTGCGTGCTCTGTACGAAAGCGACAAAGA
CTACCCAATCGAAATCGTTGCCATCAACGATCTCGGCGACGCCTCCATCAATGCTCACCTGACCAAATACGACTCTGTAC
ACGGTCGTTTTAACGCCAAAGTTGAAAACGATGCAGAAGCCATTTACGTCAACGGCGACAAAATCCTCACCTTCTCTGAG
CGTGACCCAGCCAAGCTACCATGGGCCGACCTCAAGGTTGATGTGGTATTTGAATGTACCGGTATCTTCACTTCCAAAGA
AGCCGTACAGCCACACCTGAATGCCGGTGCCAAGAAAGTCATCATCTCAGCCCCCGGCAAGAACGTGGACGCCACCGTAG
TTTACGGTGTTAACCAGCAGGTCTTGACCAGTGACATGACAGTTATCTCTAACGCGTCATGTACTACCAACTGCCTGGCG
CCTTTTGCCAAGCCACTTAACGATGCCATTGGTATTGAGTCAGGCCTGATGACCACCATCCACGCCTACACCAACGACCA
GCGTCTGTCTGACGTGTATCACAGCGACCTGCGCCGAGCCCGTGCTGCTGCCATGTCCATGATCCCAACCAAGACTGGCG
CTGCAGCTGCCGTAGGTCTGGTGGTTCCTGAGCTGCAAGGCAAGTTCGATGGTCTGGCGGTTCGCGTACCTACTGTGAAC
GTGTCTCTTGTTGACCTGTCATTCATCGCCTCTCGTGACACCACAGTAGCCGAAGTGAATGACATCATCGAAAAAGCACT
GGCTGCCGATGAAGTTCTGAGTCAGGTTCTGGCGGTAAACAAAGAGCCTCTGGTGTCTATCGACTTCAACCATAACGCCT
ATTCTTCCAACTTTGACGCAACCCAAACCCGAGTGAGTGGTCGTCTGGTGAAAGTGATGGCTTGGTACGACAACGAGTGG
GGCTTCAGCAACCGTATGCTGGACAACGCCGTTGCATTGATGAACGCCAAATAA

Protein sequence :
MTIRVAINGYGRIGRNVLRALYESDKDYPIEIVAINDLGDASINAHLTKYDSVHGRFNAKVENDAEAIYVNGDKILTFSE
RDPAKLPWADLKVDVVFECTGIFTSKEAVQPHLNAGAKKVIISAPGKNVDATVVYGVNQQVLTSDMTVISNASCTTNCLA
PFAKPLNDAIGIESGLMTTIHAYTNDQRLSDVYHSDLRRARAAAMSMIPTKTGAAAAVGLVVPELQGKFDGLAVRVPTVN
VSLVDLSFIASRDTTVAEVNDIIEKALAADEVLSQVLAVNKEPLVSIDFNHNAYSSNFDATQTRVSGRLVKVMAWYDNEW
GFSNRMLDNAVALMNAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 2e-78 50