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Name : rnhA (Sama_1881) Accession : YP_927756.1 Strain : Shewanella amazonensis SB2B Genome accession: NC_008700 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 2296821 - 2297291 bp Length : 471 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGAGCGAACTGAAACAGATCCGTATCTACACCGACGGTTCCTGTCTGGGTAACCCCGGTCCCGGTGGATACGGCGTGGT CATGATCTATAAGCAGCACCGCAAAGAACTCGCGGATGGCTTTGCCCTGACAACCAATAACCGTATGGAGCTGCTGGCCC CCATAGTGGCATTGGAAAGCCTTAAGGAACCCTGCGATGTGATCCTGACCAGTGACAGCCAATATATGCGTCAGGGCATT ACCGAATGGATCCATGGCTGGAAGAAAAAGGGCTGGGTGACTGCCAGTAAAACGCCGGTCAAGAATGTGGATCTGTGGCA ACGCCTCGATGCCGCAGCCGCCAAGCACAAGGTGGATTGGCGCTGGGTGAAAGGCCATGCGGGCCACGCCGAAAACGAAC GCTGTGACACTCTTGCCCGTGAAGCGGCCGAAGCAAAACCGACTCAAATTGATAAGGGCTATCAGCCCTGA Protein sequence : MSELKQIRIYTDGSCLGNPGPGGYGVVMIYKQHRKELADGFALTTNNRMELLAPIVALESLKEPCDVILTSDSQYMRQGI TEWIHGWKKKGWVTASKTPVKNVDLWQRLDAAAAKHKVDWRWVKGHAGHAENERCDTLAREAAEAKPTQIDKGYQP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 6e-50 | 66 |
